Pseudomonas sp. MT-1: MT1_2990
Help
Entry
MT1_2990 CDS
T10396
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03018
RNA degradation
Brite
Enzymes [BR:
psmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MT1_2990
Messenger RNA biogenesis [BR:
psmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MT1_2990
Ribosome biogenesis [BR:
psmt03009
]
Prokaryotic type
rRNA helicases
MT1_2990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BAP80165
LinkDB
All DBs
Position
complement(3336194..3337855)
Genome browser
AA seq
553 aa
AA seq
DB search
MTQEIGSFAALGIHPSVLAAVTAVGYEEPSAIQSQAIPVILGGHDMIGQAQTGTGKTAAF
ALPILSKIDPARKEVQALILAPTRELALQVATAFETYAKQMPGLTVVAVYGGAPMGPQLK
AIRQGAQVIVATPGRLVDHLSRNSALLGTIQYLVLDEADEMLKLGFMDDLEVIFEAMPES
RQTVLFSATLPHSIRAIAEKHLREPQHIKVATKTQTVTAIEQAHLMVHADQKIAAVLRLL
EVEDFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV
ATDVAARGLDVSRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTNQKVAEARLPNGQQVLEARIKKLTNSLSPLVADAEASHGELLDKLVADIGCSPRAL
AAALLRKATNGQALTLAEVEKEQPLVPTSSPRERSDRPERSGDRERRAPIPLAEGRARCR
TALGARDGIAARNLLGAILNEGGLAREDIGRIQVRDSFSLVELPEEGLERLLGKLKDTRV
GGKQLKLRRYRED
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcggcagctttgctgcactcggtattcatccttccgtactcgccgct
gtcaccgcagtgggctacgaagagccttcggcaatccagagccaggctatcccggtaatt
ctcggtggccacgacatgatcggccaagcccagaccggtaccggcaagaccgccgccttc
gcgctgcccattctgtcgaagatcgatcccgctcgtaaggaagtacaggcgcttattctc
gcgccaacccgcgaactggcgctgcaggttgccaccgcgttcgaaacctatgccaagcag
atgcctggcttgaccgtggtcgccgtctacggcggcgctccgatgggtccgcagcttaag
gccatccgtcagggcgcgcaggtcatcgtcgctacacctggccgcctggtcgaccatctg
agccgcaacagcgcactgctcggcaccattcagtacctcgtactcgacgaagctgacgag
atgctcaagctgggcttcatggacgacctcgaagtcatcttcgaagccatgccggaaagc
cgtcagaccgtgctgttctccgcgaccctgccgcactcgattcgcgcaatcgccgagaag
cacttgcgcgagccgcagcacatcaaggtcgctaccaagacccagacagtgaccgccatc
gagcaggcacacctgatggtccatgctgatcagaagattgctgccgtgctgcgcctgctc
gaagttgaagacttcgacgcactaatcgctttcgtgcgcactaagcaggcaactctggac
cttgccgccgcattggaagccaagggctacaaggctgcggcattgaacggcgacatcgcc
cagaaccagcgtgagcgcgtgatcgagtccctcaaggacggtcgtctggacatcgtggtc
gccacagacgttgctgctcgcggcctggacgtatcgcgtattactcacgtattcaacgtg
gacatgccctacgatccggagtcctacgtacaccgtatcggtcgtactggccgtgccggt
cgtgaaggtcgcgcattgctgctggtcaccccgcgtgagcgccgcatgctgcaggtcatc
gagcgtgtaaccaaccagaaagtagccgaagcccgcctgccgaacggccagcaagtgctc
gaggcgcggatcaagaagctcaccaacagtctttcaccgctggtagcggatgccgaagcc
agtcatggcgaactgctcgacaagctggtcgcggatatcggttgcagcccgcgcgcactc
gccgctgcgctgctgcgcaaggccactaacggccaggcgttgaccttggctgaagtggaa
aaagagcagccgctggtcccgaccagtagcccgcgtgagcgctccgatcgtcctgagcgt
agcggcgaccgcgagcgtcgtgctccgattcccttggccgaaggccgcgcccgctgccgt
acagcattgggtgcccgcgacggcatcgccgcgcgcaacctgctcggcgccatcctcaac
gaaggcggcctggcccgcgaagacatcggccgcatccaggtacgcgacagcttcagcctg
gtcgagctgccggaagaaggtctggagcgcctgcttggcaaactcaaggacacccgtgtc
ggcggtaagcaactcaagctgcgtcgctatcgcgaagattga
DBGET
integrated database retrieval system
