KEGG   Pseudomonas sp. MT-1: MT1_3516
Entry
MT1_3516          CDS       T10396                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
psmt  Pseudomonas sp. MT-1
Pathway
psmt03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psmt00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MT1_3516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psmt03019]
    MT1_3516
   03009 Ribosome biogenesis [BR:psmt03009]
    MT1_3516
   03036 Chromosome and associated proteins [BR:psmt03036]
    MT1_3516
Enzymes [BR:psmt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     MT1_3516
Messenger RNA biogenesis [BR:psmt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MT1_3516
Ribosome biogenesis [BR:psmt03009]
 Eukaryotic type
  90S particles
   RNase
    MT1_3516
 Prokaryotic type
  rRNA processing factors
   MT1_3516
Chromosome and associated proteins [BR:psmt03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     MT1_3516
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: BAP80691
LinkDB
Position
complement(3886471..3887160)
AA seq 229 aa
MSTSLARLERRLGYQFKDQELMLLALTHRSYAGRNNERLEFLGDAILNFIAGEALFNHFP
QAKEGQLSRLRARLVKGETLAMLARGFELGEYLRLGSGELKSGGFRRESILADTLEALIG
AIYLDAGMEAARDRVLAWLANELEGLTLVDTNKDPKTRLQEFLQSRACELPKYEVVAIQG
EPHCRTFFVECQVSLLNEKTQGQGASRRIAEQVAAASALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcacttcgttagcccgtctcgagcgtaggctcggatatcaattcaaagatcaggag
ctgatgctcctggctctgacacatcgcagctatgccggacgcaataacgagcgtctggag
tttcttggcgatgccatcctcaactttatcgccggcgaggcgttgttcaaccactttccg
caagccaaggaagggcagctctctcggctgcgcgcgcgactggttaaaggcgaaacgctt
gccatgctcgcacgcggtttcgagctcggagaatacctgcggcttggttccggcgagttg
aaaagcggtggctttcgccgtgaatcgatccttgctgatacgctcgaagctttaattggc
gccatataccttgatgcaggcatggaggcggcgcgtgaccgcgtgctggcttggcttgct
aacgagctggaagggcttacgctcgttgatacgaacaaggatccaaagactcgcctgcag
gaatttctgcaatcgcgggcatgcgaactaccgaagtacgaagtggttgcgattcagggc
gaaccgcattgccggacgttcttcgtcgagtgccaagtatcgttgctcaatgagaagact
caaggacagggtgctagcaggcgtattgccgaacaggttgccgctgcctcggcattgata
gcgctcggcgtggagaacggtaatgactga

DBGET integrated database retrieval system