Pseudomonas sp. MT-1: MT1_3550
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Entry
MT1_3550 CDS
T10396
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
psmt Pseudomonas sp. MT-1
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psmt03036
]
MT1_3550
Chromosome and associated proteins [BR:
psmt03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
MT1_3550
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
BAP80725
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All DBs
Position
complement(3919084..3920019)
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AA seq
311 aa
AA seq
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MEHWPPFFPVFPCMSAQYDPIIDRFLDALWLEKGLSDNTRDAYRSDLALFNGWLDERDVR
LVDAGRDAILDHLGWRLANGYKARSTARLLSGLRGFYRFLLREGVITIDPTLRVDLPQLG
RPLPKALSEADVEALLSAPDVGDPLGLRDRAMLEVLYATGLRVTELVGLGLEQINLRQGV
LRTFGKGNKERLVPLGEESLYWVVRYLRDARDALLSGKASDVVFPSRRGDQMTRQTFWHR
IKLHARQAGIAASISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARL
QELHAQHHPRG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaacactggccgcctttctttccagtgttcccctgcatgtcggctcaatacgacccc
attatcgatcggttccttgatgccctttggctcgaaaaagggctttcggacaacacccgc
gacgcttatcgcagtgatctggcgctgttcaacggctggttggacgagcgcgatgtgcga
ctggtcgatgcaggtcgggacgccatcctcgatcacctcggctggcgtctggctaatggc
tacaaggctcgttctaccgcgcggttgttgtcagggcttcgcgggttttatcgcttcctg
ctgcgcgaaggcgtgatcacgatcgatccaacgctgcgagtcgatctgccgcagttggga
cgaccactacccaaggcgttgtccgaggcggatgtggaggcgctgttgtctgcgccggat
gtcggtgatccgctggggttgcgtgaccgggcaatgctggaagttctttacgcgactggc
ttgcgcgtcaccgaactggtcggccttggtcttgagcagatcaatcttcggcagggcgtc
ttgcgcactttcggtaagggtaacaaggagcgtctggtgccgttgggcgaggagtccctg
tattgggtggtgcgctatcttcgcgacgctcgcgacgcgctgctctccggcaaggccagc
gatgtggtctttccgagtcggcgtggcgaccagatgacaaggcagacgttctggcaccgc
atcaagctgcatgcccggcaggcaggaatagctgcatcgatctcgccgcacacgctgcgt
catgcatttgctacgcacttgctcaaccatggtgcggatcttcgaactgtacaaatgctg
ctcggacacagtgatctatccactacgcagatctacacgcacatcgcccgcgcgcggctg
caggaactccacgcgcagcatcatccgcgtggttga
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