KEGG   Pseudomonas sp. MT-1: MT1_3556
Entry
MT1_3556          CDS       T10396                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
psmt  Pseudomonas sp. MT-1
Pathway
psmt02024  Quorum sensing
psmt03060  Protein export
psmt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psmt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    MT1_3556
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MT1_3556
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MT1_3556
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psmt02044]
    MT1_3556
Enzymes [BR:psmt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     MT1_3556
Secretion system [BR:psmt02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   MT1_3556
  Eukaryotic Sec-SRP protein
   MT1_3556
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW Zeta_toxin AAA_22 YqeC AAA_33 AAA_31 APS_kinase AAA_16 AAA_30 ABC_tran AAA_24 AAA_17 AAA_26 ATP_bind_1 AAA_19 Thymidylate_kin AAA_14 Helicase_RecD HrpJ DO-GTPase1 6PF2K KTI12 TsaE NACHT
Other DBs
NCBI-ProteinID: BAP80731
LinkDB
Position
complement(3924302..3925681)
AA seq 459 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKEFVARVKDRAV
GTEVSKSLTPGQAFVKIVRAELEELMGAANEDLDLSVVPPAVVLMAGLQGAGKTTTVGKL
ARFLKERKKKSVLVVSADVYRPAAIKQLEMLATEVGVTFFPSDTSQKPVEIALAAIREAK
LKYIDVVLVDTAGRLAIDAEMMAEIQAVHAAIKPAETLFVVDAMTGQDAANTAKAFGEAL
PLTGVVLTKVDGDARGGAALSVRHITGKPIKFLGMGEKSDALEPFHPDRIASRILGMGDV
LSLIEQAEQTLDREKAEKLTKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLSQMGNAQGAAEKQFKQMEAIINSMTPVERRNPDIISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKVSGKGGMAKMMRGMGGMFPGGGGMPKF
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctaaccgaccgcctctcacagacgcttcgccatgttaccggcaaggcc
aaactgaccgaggacaatatcaaggacaccttgcgcgaagttcgcatggcattgctagaa
gccgatgtcgcgctacccgtggtcaaggagttcgtcgccagggtcaaggacagggcagtc
ggcacggaagtctccaagagcctgacgcccggtcaggcctttgtgaagatcgttcgcgcc
gagctggaagagctgatgggcgcggccaacgaagacctcgatctcagtgtggtgccgccc
gctgtggtgctgatggccggcctgcagggtgcgggtaagacgaccacggtcggcaagctg
gcaaggttcctcaaagagcgcaagaagaagtcggtgctggtggtttcagccgacgtctat
cgcccagcagcaatcaaacagctggagatgctcgcgacggaagtaggggtgacttttttc
ccttccgataccagccagaaacccgtggaaatcgcactggcggcgattcgtgaggccaag
ctcaaatacatcgatgtggtgctcgtcgatacggccggccggctagccatcgatgctgaa
atgatggccgagatccaggccgttcatgcggcgatcaagccggccgagacactgttcgtg
gttgacgccatgacggggcaggacgctgcgaatactgctaaggcgttcggtgaggcgctc
cctttgaccggtgtggtgctgaccaaggtcgacggcgacgcgcgcggtggcgctgccctg
tcggtgcgacatatcacaggtaagccgatcaagtttctcggcatgggcgagaagagtgat
gcgctcgagccgtttcatccggaccggatcgcctctcgaatcctgggcatgggcgatgtg
ctcagcctgatcgagcaggctgagcagacgctcgatcgggaaaaggccgagaagctcact
aagaagctgaagaagggcaaaggttttgatctggaagatttccgtgatcagcttcagcaa
atgaaaaacatgggtggcctaggcggcttgatggataaactgccatcaatcggcggtgtg
aatctgtcgcaaatgggcaatgcgcagggcgcggcggagaagcagttcaagcagatggag
gccatcatcaactcgatgacgcctgttgagcggcgcaacccggacatcatcagcggttcg
cgcaagcggcgcatcgccatgggctccggcacgcaagtgcaagatattggtcgtctgatc
aagcagcacaagcaaatgcagaaaatgatgaaaaaggtcagcggcaaaggcggcatggcg
aaaatgatgcgcggcatgggcggcatgtttccaggcggcggcggaatgcccaagttctaa

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