Pseudomonas sp. MT-1: MT1_3688
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Entry
MT1_3688 CDS
T10396
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psmt Pseudomonas sp. MT-1
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psmt03016
]
MT1_3688
Enzymes [BR:
psmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MT1_3688
Transfer RNA biogenesis [BR:
psmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MT1_3688
Prokaryotic type
MT1_3688
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAP80863
LinkDB
All DBs
Position
complement(4058438..4059355)
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AA seq
305 aa
AA seq
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MAQVKRIRRAVSGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETVAQLGVTTTTADAEGEVIERKPVAVSQAQLEALLPQFRGDLQ
QVPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLDLLSLEDDRARLAVACSKGTYI
RTLVEDIGHALGCGAHVAELRRTQAGPFDLSQTVSLEELERVHAEGGAEAVDAFLKPVDS
GLEHWPLLQLSEHSAFYWLHGQPVRAPEAPKFGMLRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggcccaggtaaaacgcatccgccgcgcggtcagcggcatcattcttctcgacaaaccc
cgcggcttcacatcgaacgccgcgctgcagaaagttcgctggttgctcaacgccgagaag
gccgggcataccggtagtctggacccgctggcgaccggtgttctgccactgtgtttcggg
gaagctaccaagttctctcaatatttgctggatgctgataagggctacgagaccgttgcc
caactcggtgtgaccactaccacggccgatgcagaaggtgaggtgatcgagcgtaagcct
gtcgccgtcagccaagcgcagctagaggcgcttttgccacagtttcgcggtgatctgcag
caagtgccgccgatgtattcggcacttaaacgcgatggccaaccgctgtacaagctggcg
cgagctggagaggtagtggagcgcgagccgcgttctgttaccattgcgcgcttggatttg
ctgtcgcttgaagatgaccgtgcgcgattggcggttgcctgtagcaaaggcacctatatc
cggacgttggtcgaggatatcgggcatgcgctgggttgtggtgcgcacgtcgccgaactg
cgtagaactcaagcagggccgttcgatctcagccagacggtcagtcttgaagagctggaa
cgagtgcacgcagaagggggcgctgaggcggttgatgcctttctgaaaccggtggatagc
gggcttgaacattggcctctactgcaactttcagagcacagcgcgttttattggttgcat
gggcagccggtacgcgccccggaagcgccgaagttcggcatgctgcgagtgcaggatcat
aatggtcgcttcatcggtatcggtgaggtgagcgaagacgggcgtattgcgccgcgtcga
ctgattcggtcggaatga
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