Pseudomonas sp. MT-1: MT1_3929
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Entry
MT1_3929 CDS
T10396
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03030
DNA replication
psmt03430
Mismatch repair
psmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MT1_3929
03430 Mismatch repair
MT1_3929
03440 Homologous recombination
MT1_3929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmt03032
]
MT1_3929
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_3929
Enzymes [BR:
psmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MT1_3929
DNA replication proteins [BR:
psmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MT1_3929
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MT1_3929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAP81103
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All DBs
Position
4273443..4274159
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AA seq
238 aa
AA seq
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MKRSGSRTAPDWPAVFAQLARTARDPRLVRFYEAGTVSADTPLEQVPLLALDVETTGLDS
QRDSIVSLGLMPFDLQRIRCREASYWVVKPVCDLSSQSITFHHITHSDVSNAPRLAHVLD
ELLEKMAGRIMVVHYRSIERRFLDQAVHHLLGEGLQFPVIDTMQLEARLHPRRRGWLRRV
LSTKRPVSIRLADSRLRYNLPLYQAHHALTDALATAELLQAQSAHHYPSTTAVGDLWN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtagcggatctcgtacggcccccgactggccagccgtgtttgcccagctcgcg
cgaacggcccgcgacccgcgccttgtacgtttctacgaggccggtacggtcagtgccgac
acgccactggagcaggtgcccttgctcgccctggacgtcgagaccaccggcctggacagc
caacgcgactcgatcgtcagccttggcctgatgcccttcgatctgcagcggatccgctgc
cgcgaggccagctactgggtcgtcaagccggtgtgcgatctgagcagtcagtcgatcacc
tttcatcacatcacgcactcggatgtcagcaacgcgccgaggctggcccacgtgctcgac
gagctgctggagaaaatggctggcaggatcatggtggtgcattaccgcagcatcgagcgg
cgctttctcgaccaggccgtacaccacctcctgggcgaaggcctgcagtttccggtgatc
gatacgatgcagctggaagcacggctgcacccgcgccgacgtggctggctgcgccgagtg
ctcagcaccaagcggcccgtatcgatccgcctggccgacagccgcctgcgctataacctg
ccgctgtaccaggcccaccatgccctgaccgatgccctggcaaccgccgagctgttgcag
gcgcaatcggctcaccactacccgtcgacaaccgccgtgggcgatctttggaactga
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