Entry |
|
Name |
(GenBank) exonuclease SbcD
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
psmt Pseudomonas sp. MT-1
|
Brite |
KEGG Orthology (KO) [BR:psmt00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:psmt03400]
MT1_3979
DNA repair and recombination proteins [BR:psmt03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MT1_3979
Archaeal homologous recombinant proteins
MT1_3979
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4331033..4332268
|
AA seq |
411 aa
MRLIHTSDWHLGQTLHGQDRDYEHAQFLAWLLDQLTVRQPDALLIAGDIFDTVNPPLKAQ
ERLYDFIVRVHEKLPQLDIVMIAGNHDSGGRIELPGPLMRRLNAHAIGRISWLADHQLDH
GRLLVPLHDAKGEVAGWCLALPFLRPAEVTGGEAGEDYMAGIRHVHQHLIAAAEAQRQPG
QALIAMSHAHMAGGAVSEDSERNIVIGNAEALPASLFPEPIAYVALGHLHKPQKVAGQER
IRYSGSPLPLSFGEINYPHQVLLVSFEGDQLASVEALPVPRAVEMIRVGRAPLADVISQL
ESLPPVGLFAENLPWLEVRVQLDEPLPDLRQRIETAINGKACRLVRIASEYAGKRGEADS
EVLLGLDQITPQELFARAWEEQFGNPPDEQALDDFASLLQGVEFEGEGDAR |
NT seq |
1236 nt +upstreamnt +downstreamnt
atgcgcctgatccatacctccgactggcacctcggccagaccctccacggccaggaccgc
gactacgaacacgcgcagttcctcgcctggctgctcgaccagctgaccgtccgccagccg
gacgctctgctcatcgccggcgacatcttcgacacggtcaacccgccgctcaaggcccaa
gagcgcctgtacgacttcatcgttcgcgtccacgaaaagctaccgcagctggatatcgtg
atgatcgccggcaaccacgactccggcgggcgcatcgaattgcccgggccgcttatgaga
cgcctcaacgcccatgccatcggccgtatcagttggctggctgatcatcagctcgaccac
ggccgactgttggtcccgctgcacgatgccaagggcgaagtggcgggctggtgcctggcc
ctgccctttctgcggccggcagaagtcaccggcggtgaggcgggcgaggactacatggca
ggcatccgtcatgtgcatcaacacctaattgccgcggccgaggcgcagcgccagcccggc
caggcgctgatcgccatgagccatgcccacatggccggcggcgcggtgtcggaggattcg
gagcgcaatatcgtcatcggcaatgccgaggcgctgcccgccagcctgtttcctgagccc
atcgcctacgttgccctcggccatctgcacaaaccgcaaaaggtcgccgggcaggagcgc
atccgctacagcggctcgcccttgccgctttcgttcggcgaaatcaactacccgcatcag
gtgttgctggtcagcttcgagggcgaccagctcgccagcgtcgaggcgctacccgtgccc
cgcgccgtggagatgatccgcgtcggccgcgcgcccttggccgacgtcatcagccagctc
gaatcgctgccgccggtaggcctgttcgccgagaacctgccctggctggaagtgcgcgtg
cagctcgacgagccgcttccggacctgcgccagcgcatcgaaacggcgatcaacggaaag
gcctgccggctggtgcgaatcgccagtgaatatgcagggaaacgcggtgaggccgactcg
gaggtactgcttggcctcgaccagataaccccgcaggaactcttcgcgcgcgcctgggaa
gaacagttcggcaacccgccggatgagcaggcactggacgacttcgccagcctcttgcaa
ggcgttgagttcgaaggtgaaggagacgcccgatga |