KEGG   Pseudomonas sp. MT-1: MT1_3979
Entry
MT1_3979          CDS       T10396                                 
Name
(GenBank) exonuclease SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
psmt  Pseudomonas sp. MT-1
Brite
KEGG Orthology (KO) [BR:psmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psmt03400]
    MT1_3979
DNA repair and recombination proteins [BR:psmt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MT1_3979
    Archaeal homologous recombinant proteins
     MT1_3979
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2
Other DBs
NCBI-ProteinID: BAP81153
LinkDB
Position
4331033..4332268
AA seq 411 aa
MRLIHTSDWHLGQTLHGQDRDYEHAQFLAWLLDQLTVRQPDALLIAGDIFDTVNPPLKAQ
ERLYDFIVRVHEKLPQLDIVMIAGNHDSGGRIELPGPLMRRLNAHAIGRISWLADHQLDH
GRLLVPLHDAKGEVAGWCLALPFLRPAEVTGGEAGEDYMAGIRHVHQHLIAAAEAQRQPG
QALIAMSHAHMAGGAVSEDSERNIVIGNAEALPASLFPEPIAYVALGHLHKPQKVAGQER
IRYSGSPLPLSFGEINYPHQVLLVSFEGDQLASVEALPVPRAVEMIRVGRAPLADVISQL
ESLPPVGLFAENLPWLEVRVQLDEPLPDLRQRIETAINGKACRLVRIASEYAGKRGEADS
EVLLGLDQITPQELFARAWEEQFGNPPDEQALDDFASLLQGVEFEGEGDAR
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgcgcctgatccatacctccgactggcacctcggccagaccctccacggccaggaccgc
gactacgaacacgcgcagttcctcgcctggctgctcgaccagctgaccgtccgccagccg
gacgctctgctcatcgccggcgacatcttcgacacggtcaacccgccgctcaaggcccaa
gagcgcctgtacgacttcatcgttcgcgtccacgaaaagctaccgcagctggatatcgtg
atgatcgccggcaaccacgactccggcgggcgcatcgaattgcccgggccgcttatgaga
cgcctcaacgcccatgccatcggccgtatcagttggctggctgatcatcagctcgaccac
ggccgactgttggtcccgctgcacgatgccaagggcgaagtggcgggctggtgcctggcc
ctgccctttctgcggccggcagaagtcaccggcggtgaggcgggcgaggactacatggca
ggcatccgtcatgtgcatcaacacctaattgccgcggccgaggcgcagcgccagcccggc
caggcgctgatcgccatgagccatgcccacatggccggcggcgcggtgtcggaggattcg
gagcgcaatatcgtcatcggcaatgccgaggcgctgcccgccagcctgtttcctgagccc
atcgcctacgttgccctcggccatctgcacaaaccgcaaaaggtcgccgggcaggagcgc
atccgctacagcggctcgcccttgccgctttcgttcggcgaaatcaactacccgcatcag
gtgttgctggtcagcttcgagggcgaccagctcgccagcgtcgaggcgctacccgtgccc
cgcgccgtggagatgatccgcgtcggccgcgcgcccttggccgacgtcatcagccagctc
gaatcgctgccgccggtaggcctgttcgccgagaacctgccctggctggaagtgcgcgtg
cagctcgacgagccgcttccggacctgcgccagcgcatcgaaacggcgatcaacggaaag
gcctgccggctggtgcgaatcgccagtgaatatgcagggaaacgcggtgaggccgactcg
gaggtactgcttggcctcgaccagataaccccgcaggaactcttcgcgcgcgcctgggaa
gaacagttcggcaacccgccggatgagcaggcactggacgacttcgccagcctcttgcaa
ggcgttgagttcgaaggtgaaggagacgcccgatga

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