Pseudomonas sp. MT-1: MT1_4134
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Entry
MT1_4134 CDS
T10396
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03020
RNA polymerase
Brite
Enzymes [BR:
psmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MT1_4134
Transcription machinery [BR:
psmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MT1_4134
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MT1_4134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BAP81308
LinkDB
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Position
complement(4482372..4486571)
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLNLLKNQGQIEEFDAIKIALASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLHEIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFYGSGNLPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEMRGMATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAINAKGEGRVFADLQEVDRVFRGG
EASLHARVKVRINETIKDRDGSITKNTRIVDTTVGRALLFQVVPAGLPFDVVNQPMKKKA
ISKLINLCYRTVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIDAATEE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVIDRDGNEAEQDSFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTADSGYLTRRLVDVAQDLVVTEVDCGTEQGLFMTPHIEGGDVVEPLGERVL
GRVIARDVLKPGSEEVLVPAGTLVDEQWVDFIELNSIDEVVVRSPISCETRYGICAKCYG
RDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAVDNVMVKNGGTIRL
HNLKHVERADGALVAVSRSGELAVADDFGRERERYKLPYGAVISIKEGDKVDAGAVVAKW
DPHTHPIVTEMKGVVTFVGMEENITIKRQTDELTGLTNIEVMDPKDRPASGKDIRPAIKM
VDSNGKELLLPGTDVPAQYFLPANALVGVADGAEINVGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPTDGTDPYEELIPKWRHLNVFE
GEQVNKGEVISDGPSNPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEVAESGDSSFIKGDQMELTHVLEENERLSADDKFGSKYIRVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLQYHSERKRKREAEKPVR
VSADEVEAALTEALNSSGN
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctgaatctgttgaaaaaccagggtcaaatcgaagagttcgatgccatc
aagattgcattggcttcgcccgagatgatccgttcctggtcctttggtgaagtcaagaag
ccagagaccatcaactatcgtacgttcaagcccgagcgcgacggcctgttctgcgccaag
atctttggcccggtcaaggactatgagtgcctgtgcggtaagtacaagcgcctcaagcat
cgcggcgttatctgtgagaagtgcggcgtcgaagttgcgctggccaaggtgcgccgtgag
cgtatggcccacattgagctggcttcgcccgttgcacacatctggttcctgaagtcgttg
ccgagccgtatcggcttgctgctggacatgaccctgcgtgacatcgagcgcgtgctttat
ttcgaaagctacgtcgtcatcgatccgggcatgaccacgctcgagaaaggacaactgctc
aacgacgagcagtatttcgaagcattggaagagttcggcgacgatttcgatgcccgcatg
ggcgctgaagcggtgcgcgagctgctgcacgaaatcgacctggagcacgagatcggtcgc
ctgcgcgaagagattccgcagaccaactcggaaaccaagatcaagaagctgtccaagcgt
cttaagctgatggaagccttctacggttcaggcaaccttcctgagtggatggtactgacc
gttctgcctgtactgccgccggatctgcgtccattggttccgctcgatggtggtcgattc
gcgacttcggatctcaacgatctgtaccgccgcgtgatcaaccgtaacaaccgtctcaag
cgcctgctcgatctgtccgcaccggacatcatcgtgcgcaacgaaaagcgcatgttgcag
gaagcggtcgacgcactgctcgacaacggtcgccgcggtcgcgccatcactggctcgaac
aagcgcccgctgaagtccctggccgacatgatcaagggcaagcaaggtcgtttccgtcag
aacctgctcggcaagcgcgtagactactctggccgttcggttatcaccgttggcccgacc
ctgcgtctgcatcagtgcggtctgccaaagaagatggcgctcgagctgttcaagccgttc
atcttcggcaagctggaaatgcgcggcatggcgaccaccatcaaggccgccaagaagatg
gtggagcgcgaactacctgaggtttgggacgttctcgctgaggtcatccgcgaacacccc
gtattgctcaaccgcgcaccgacgctgcaccgtctgggtatccaggcgttcgagccggta
ctcatcgaaggcaaagcgattcagctgcacccgctggtctgtgctgcgtacaacgccgac
ttcgacggcgaccagatggccgttcacgtgccgctgacactggaagcccagctcgaagcg
cgggcgctgatgatgtcgaccaacaacatcctgtcgccagccaacggtgagccgatcatc
gtgccgtcgcaggacgtggtcttgggtctttattacatgacccgggaagcgatcaacgcc
aagggtgaaggtcgcgtatttgctgacctgcaggaagtcgaccgtgtgttccgcggtggc
gaagcgtctctgcacgcccgcgtcaaagtgcggatcaacgagaccatcaaggatcgcgac
ggcagcattaccaagaacactcgtatcgtcgacaccaccgttggccgcgcgctgttgttc
caggtggttccggccggcctgccgttcgacgtggtcaaccagccgatgaagaagaaggcg
atctccaaactgatcaacctgtgctaccgcaccgttggtctgaaggataccgttatcttc
gccgaccagctgatgtacaccggtttcgcatactcgaccatttcgggcgtgtcgatcggt
gtgaacgacttcgtcatcccggatgagaaggcgcgcatcatcgacgccgctaccgaggaa
gtgaaggagatcgagtcgcagtacgcctctggcctggtgactcagggcgagaagtacaac
aaggtgatcgacctctggtccaaggccaacgacgaagtctctaaggcgatgatggccaac
ctctcgaaagagaaggtcatcgaccgcgatggcaatgaagccgagcaggactcgttcaac
tcgatgtacatgatggctgactccggtgcgcggggttccgctgctcagatccgtcagctg
gccggtatgcgtggtttgatggccaagcccgacggttcgatcatcgagacgccgatcacg
gcgaacttccgtgaaggtttgaacgtactccagtacttcatctccactcacggtgctcgt
aagggcctggcggataccgctctgaaaaccgcggactccggttacctgacccgtcgtctg
gttgacgtggcgcaggatctggtggttaccgaggtcgactgcggtaccgagcagggtctg
ttcatgactccgcacatcgagggcggcgacgtggtcgagccgctgggcgagcgcgtgctg
ggccgtgttattgcgcgtgatgtgctcaagcccggcagcgaagaggttttggttccggcc
ggaacattggttgacgagcagtgggtcgacttcatcgagctcaacagcattgacgaagtt
gtggttcgctcgccgatcagctgtgaaacgcgctatggcatttgtgcgaagtgctacggt
cgcgatctcgctcgcgggcaccaggtcaacatcggtgaggcagtgggcgttattgctgcg
caatcgattggtgagcctggtactcagctgacgatgcgtacgttccacatcggtggtgcg
gctagccggacttctgcggtcgacaacgtcatggtcaagaatggcggcactatccgcctg
cataacctcaagcatgtagagcgtgctgacggcgcgctggttgcggtgtcccgttccggt
gagctggcggttgccgacgacttcggtcgtgagcgcgagcgttacaagctgccttacggt
gcagttatctcgattaaggaaggcgacaaggtcgacgcaggcgctgtggtggccaagtgg
gatccgcacacccacccgatcgtcaccgagatgaagggtgtcgtgaccttcgtcggtatg
gaagagaacatcaccatcaagcgccagaccgatgaactcaccggtctgaccaacatcgag
gtgatggatccgaaggaccgtccggcatcgggtaaggacattcgtccggcgatcaagatg
gtcgactccaatggcaaggaattgctgctgccgggtaccgacgtaccggctcagtatttc
ctgccagctaatgccctggtgggtgtggctgacggtgccgagatcaatgtgggtgacgtt
attgcgcgtatcccgcaggaaacctcgaagacccgtgacatcaccggtggtctgccacgc
gtcgccgatctcttcgaggcacgtcgtccgaaagagccttcgatcctggctgaaatcagc
ggtacaatctccttcggcaaggaaaccaagggcaagcgtcgcttggtgatcacgccgacc
gatggtaccgatccgtatgaggagctgattccgaagtggcgtcacctcaacgtgttcgaa
ggcgaacaggtgaacaagggtgaggttatctccgacggtccgagcaacccgcacgacatc
ctgcgtctgctgggcgtgagtgcgctggccaagtacatcgtcaacgagattcaggacgtt
tatcgtctgcagggcgtgaagatcaacgacaagcacatcgagacgattctgcgtcagatg
ctgcgcaaggttgaagtggcggaatccggcgattcgagcttcatcaagggcgaccagatg
gagctcactcacgttcttgaggagaacgagcgtctctctgcggacgacaagttcgggtcg
aagtacatccgcgtgctgctgggtatcaccaaggcctcgctgtctactgagtcgttcatt
tcggcagcgtccttccaggagaccactcgcgtcctcaccgaggccgcagtgacgggcaag
cgcgattatctgcgtggtttgaaagaaaacgtggtcgtgggtcgcctgatcccggccggt
accgggcttcagtatcacagcgagcgtaagcgcaagcgtgaagctgaaaagccggttcgc
gtgagtgccgatgaagtcgaagcggcgctgaccgaggcgctcaattcgagcggtaactga
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integrated database retrieval system
