Pseudomonas sp. MT-1: MT1_4237
Help
Entry
MT1_4237 CDS
T10396
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MT1_4237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_4237
Enzymes [BR:
psmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MT1_4237
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MT1_4237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
TrwB_AAD_bind
AAA_25
AAA_22
AAA_16
nSTAND3
nSTAND_NTPase5
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
BAP81410
LinkDB
All DBs
Position
4602449..4604569
Genome browser
AA seq
706 aa
AA seq
DB search
MRLRVPFGRREIIGILVEVVSHSEVPEAKLKPALELLDTRPPLPAPLFKLCLWTAQYYQH
SLGDTLSWALPVLLRQGEPAEARQERFWHAVNGARPEDPRLSRAPRQREALKTIAQHPHG
VAHALLSQLQLSKDSLDLLLQKGLLSVETRRFHQTPRHQGSWLLQPELPLNQQQRAAFEA
IRAGLDGFQTYLLAGVTGSGKTEVYLQLIHQVLEAGKQALVLIPEINLGPQTLARFERRF
NARIALLHSNVNDRERLDAWLAARDGEADIIIGTRSALFTPMKNPGLIILDEEHDASYKQ
QEGLRYHARDLAVVRARQENVPILLGSATPSLESLHNAHSGRYGLLKLTERAGGAQAPRF
LRLDIKSRPLDSGISGPLQQAMAQTLAAGQQVLVFLNRRGFAPSLLCHDCGWIGQCPRCD
ARMTLHQRHNELRCHHCGHAERPPHSCPDCNKLDLRPVGAGTERAEERLATLFPDYPVLR
IDRDSTSRKGSMEQLLATINRGEPCVLVGTQMLAKGHHFPRVTLVAILDADGGLFSADFR
ASERMAQLIVQVAGRAGRAEEPGKVIIQTHLADHPLLVQLTEQGYFAFAEQALSERRAAG
LPPFSHLALLRAEAVKPGQAEDFLDQACIQAEQLIAQLGLTGVELLGPVPAPMERRAGRF
RAQLLLQANARAPLHNLMSAWMPQVEALPGSRTVRWSLDVDPIDLF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgcgtaccatttggccgacgcgaaatcatcgggatactggtagaggtcgtc
agtcacagcgaagtccccgaagcgaagctcaagccggctctggagttgctcgatacgcga
cctcccctaccggcaccgctgttcaagctatgcctgtggactgcccagtattaccagcac
agcctcggcgacacgctcagctgggcgctgccagtcctgctgcgccagggcgaacccgcc
gaggcgagacaggagcgcttctggcatgcagtcaacggcgcgcggcccgaagaccctaga
ctgagccgggcgccacgccaacgcgaagcactgaagaccattgctcagcatcctcacggc
gtggcgcatgccctgctttcgcagctgcagctgagcaaagacagccttgatttgctgttg
cagaaaggtctgctgagcgtcgagacccggcgcttccaccagactccgcggcaccagggc
agctggctgctgcaaccggaactaccgttgaaccagcagcaacgcgccgccttcgaagcc
attcgcgccggcctcgatggctttcagacgtatctgctcgccggcgtcaccgggagtggc
aagaccgaggtctacctgcagctcatccatcaggtgcttgaggcgggcaagcaggcgctg
gtgttgattccggaaatcaacctcggcccgcagaccctggctcgcttcgagcggcgcttc
aatgcccgcatcgccttgctccactccaacgtcaacgaccgcgaacgcctggatgcctgg
ctcgcggcgcgggacggcgaggcagacatcatcataggcacccgctcggccctgttcacc
ccgatgaaaaatcctgggcttattatcctcgatgaggagcatgatgcttcctataaacag
caggaggggctgcgttatcacgcacgtgacctggccgtggtcagagcgcgccaagagaac
gtcccgattttgttggggtcggcgacaccgtcgctggaaagcctgcacaacgcgcacagc
gggcgctacggactattgaagctgaccgagcgtgccggaggggcacaagcgccacgcttc
ctgcgcctggacataaagagccgcccgctcgattccggcatttccggcccgttgcagcag
gccatggcgcagacacttgccgccggacagcaggtgctggtgttcctcaaccggcgcggc
ttcgccccctcgctgctgtgccacgattgcggatggatcggccagtgtcctcgctgtgac
gccaggatgacgctgcatcagcgtcacaacgagctgcgctgccatcactgcggccatgcc
gaacgcccgccgcatagctgtccagactgcaacaagctcgacctgaggcccgtaggcgcg
ggcaccgagcgagcggaggagcgactcgccacgctctttcctgactatccggtgctgcgc
atcgatcgtgacagcacctctcgcaaaggctcgatggagcagctgctggccaccatcaac
cgtggcgagccatgcgtgctggtgggcactcagatgctcgcgaagggccaccacttcccg
cgcgtgaccttggtcgccattcttgatgcggacggtggtttgttttcggccgatttccgc
gcaagcgaacggatggctcagctgatcgtgcaggtagccggccgcgctgggcgggccgag
gagcccggcaaagtgatcatccagacccacttggctgaccacccgctgctggttcagctg
accgagcagggctacttcgccttcgctgaacaggcactaagcgagcgtcgcgcggctggc
ttgcctcctttcagccatcttgcgctgttgcgggccgaggcggtgaagcccggccaggcc
gaagacttcctcgatcaagcctgtattcaggccgaacagctgatagcgcaactcggcctc
acgggtgtcgagctgctggggccagtgcccgctccgatggagcgacgtgccgggcgtttt
cgtgcgcagctgctgctacaagctaacgcccgcgcaccactgcataaccttatgagcgcc
tggatgccgcaggtagaggcattgccgggtagccgcaccgtccgctggtcgttggatgtt
gacccgatcgacctgttctga
DBGET
integrated database retrieval system
