Pseudomonas sp. MT-1: MT1_4376
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Entry
MT1_4376 CDS
T10396
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MT1_4376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psmt03021
]
MT1_4376
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_4376
Enzymes [BR:
psmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MT1_4376
Transcription machinery [BR:
psmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MT1_4376
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MT1_4376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAP81549
LinkDB
All DBs
Position
4750426..4750689
Genome browser
AA seq
87 aa
AA seq
DB search
MARVTVEDCLDNVDNRFELVMLATKRSRQLATGGKEPKVAWENDKPTVVALREIASGLVD
YDVIAQDEIVDDEPLFVQYEEEPNEAL
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttaccgttgaagactgcctggacaacgtagataaccgcttcgagctggtc
atgctcgcgaccaagcgctcgcgccaactggccaccggtggcaaagagccgaaggtagct
tgggaaaatgacaagccgaccgtcgtggccctgcgtgaaatcgcctcaggcctagtggat
tacgatgtaatcgctcaggacgaaattgtcgatgacgagccactgttcgttcagtacgag
gaagagcccaacgaggccctctga
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