KEGG   Pseudomonas sp. ML2-2023-6: V6L79_03675
Entry
V6L79_03675       CDS       T10713                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psmz  Pseudomonas sp. ML2-2023-6
Pathway
psmz00300  Lysine biosynthesis
psmz00470  D-Amino acid metabolism
psmz01100  Metabolic pathways
psmz01110  Biosynthesis of secondary metabolites
psmz01120  Microbial metabolism in diverse environments
psmz01230  Biosynthesis of amino acids
Module
psmz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psmz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    V6L79_03675 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    V6L79_03675 (dapF)
Enzymes [BR:psmz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     V6L79_03675 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: WWT67080
LinkDB
Position
815052..815882
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQIKVETKSGIIELNVRSDGQISVDM
GPPRLVPADIPFVADAQALSYELDVDGQTVELAAVSMGNPHAVLRVDDINAAPVHELGPK
IEHHPRFPARVNVGFLHVIDRQRGQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
ILDLPGGRLSIEWAGPGHSVIMTGPAMRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgttgctgcgttttaccaaaatgcacggcctgggcaatgatttcatggttctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaaacaatggggtgatcggcacacg
ggcgtcggttttgatcaattattgatcgttgaggcgccgagcaacccggaagtggatttc
cgttaccggatcttcaactccgacggctccgaagttgagcaatgcggcaacggtgcgcgc
tgttttgcgcgctttgtgctcgacaagcgtttgaccaccaagcgccagatcaaggtcgaa
accaaaagcggcatcatcgaactgaacgtgcgcagtgatgggcaaatcagtgtcgacatg
ggcccgccgcgtctggtcccggccgacatcccgtttgtggccgacgcgcaagcgctgagc
tacgaactggatgtcgacgggcagactgttgagttggctgccgtgtcgatgggcaacccc
catgcggtattgcgtgtcgacgatatcaacgccgcgccggtgcatgagctgggcccaaaa
attgaacatcacccgcgctttccggcgcgggtcaatgtcggttttctgcacgtaattgat
cgtcagcgcgggcaactgcgggtctgggaacgtggcgccggggaaacccaggcctgcggc
accggggcttgcgccgccgctgtggctgcgatcagccagggttggatggactcaccgctg
atccttgatttgcccggtggccgtttgtccatcgaatgggcaggtcctggccattcagtg
atcatgaccggcccggcgatgcgtgtttacgaaggacaagtccgtttatga

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