Pseudomonas sp. ML2-2023-6: V6L79_04165
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Entry
V6L79_04165 CDS
T10713
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz03030
DNA replication
psmz03410
Base excision repair
psmz03420
Nucleotide excision repair
psmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6L79_04165 (polA)
03410 Base excision repair
V6L79_04165 (polA)
03420 Nucleotide excision repair
V6L79_04165 (polA)
03440 Homologous recombination
V6L79_04165 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmz03032
]
V6L79_04165 (polA)
03400 DNA repair and recombination proteins [BR:
psmz03400
]
V6L79_04165 (polA)
Enzymes [BR:
psmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6L79_04165 (polA)
DNA replication proteins [BR:
psmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
V6L79_04165 (polA)
DNA repair and recombination proteins [BR:
psmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
V6L79_04165 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V6L79_04165 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
WWT67170
LinkDB
All DBs
Position
907940..910708
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVMDIEGVKEKFGVSPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVGGGLVDLYEKLDIVPTLPIRGAKNLPAKLEEHREM
AFLSYQLATIKIDVPLDVGLEDLHLKAPDCEKLIELYTELEFKSWIAEVEREAKRAGQVI
VHEAPEALAEAQQQYETILDQVRFDVWLKKLNDAKLIAFDTETTGLDAQKAQLVGLSFAV
KPGEAAYIPLTHSYMGVPEQLDRDTVLRALKPLLEDPSKAKVGQHAKYDMNILANCAIGG
DQACGIMVQGVAFDTMLESYVLDSTGSRHDMDSLALKYLGHTTTSFQDIAGKGAKQLTFD
QISLEQAGPYAAEDADVTLHLHHVLHEKLAAIPSLNTVLIDIEMPLVPVLARIERQGALV
DANLLGIQSVELGDKLVALEREAFAIAGEEFNLSSPKQLGVILYEKLGLPIISKTAKGQP
STAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVTAT
GRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNNLDVHSATAAEVFGVELADVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLDYMERTRTQAAEQGYVETIFGRRLYLPEINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDNWLSASGLDARVILQVHDELVLEVREDLVDQVRDEVRVHMSD
AAKLDVPLVVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgtcctggtggacggttcttcatatctgtaccgcgcttttcac
gcgctgccgccgctgactacgtccaagggcctgcccaccggcgccgtaaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtatccggacagtccgtttgcggtggtttttgat
gccaagggcgggacatttcgcgatgacatgtacgccgaatacaaggccaatcgcccgagc
atgcccgatgacatgcgggtgcaaatcgagccattgcacgccagcgtgatcgcgctgggt
ttccctttactgtgcgttgaaggcgttgaggcggacgatgtaatcggtactctggcccgc
agcagcgccgcggcagaccgaccggtggtcatctcgaccggcgacaaggacatggcgcaa
ctggtcgatgggcacatcaccctggtcaacaccatgaccggcagcgtgatggacattgag
ggcgttaaagagaagtttggcgtctcgcccgagcagatcatcgactatctcgcgctgatg
ggcgattcgtccgacaacattcctggggtgccgggtattggtccaaaaaccgcttctggt
ttgctggtaggcgtaggcggggggctggtcgacctgtacgaaaaactcgatatcgtgccg
accctgcccatccgtggcgcgaaaaatctgcccgccaaacttgaagaacaccgggaaatg
gcatttttgtcgtaccagttggccacgatcaagatcgatgtgccgctggacgtcggcctg
gaagacttgcacctcaaggcccccgactgcgaaaaactgattgagctatacaccgaactg
gaattcaaaagctggattgccgaggttgagcgcgaggccaagcgtgccggccaggttatt
gttcatgaagcgcctgaagccctggccgaagcgcaacagcagtacgaaaccatccttgat
caggttcgtttcgatgtgtggctgaaaaagctcaacgacgccaagttgattgcctttgat
accgaaaccactggccttgatgcgcagaaggcgcaactggtggggctgtcgttcgcggtc
aaacccggcgaagcggcctacattccgttgacccactcctatatgggcgtgcccgagcag
ctggatcgcgacactgttttgcgtgctctcaagccgttgctggaagacccgagcaaagcc
aaggtcggacaacacgccaagtacgacatgaatattctggccaactgcgccatcggtggc
gatcaggcgtgcgggatcatggtgcagggcgttgcctttgacaccatgcttgagtcctat
gtactcgactccacgggcagccgtcacgacatggacagcctggccctcaagtacctgggg
cacaccaccaccagcttccaggacatcgcaggcaaaggcgccaagcaactgacctttgac
cagatttcgctggaacaggccgggccgtacgcagctgaagacgccgacgtgaccctgcat
ttgcaccatgtactgcacgaaaagctggctgcaattccaagcctgaacaccgtgttgatt
gatattgaaatgccgctggtgccggtactggcgcgtattgagcgtcagggtgcactggtg
gatgccaatctgctgggcattcagagcgttgagctgggtgacaaactggttgcgcttgag
cgtgaggctttcgctatcgcgggtgaggaattcaatctgagttcgcctaagcaattgggt
gttattctgtatgaaaaactcggtctgccgattatcagcaaaactgccaaaggccagcct
tcgaccgccgaagcagtgttggccgaactggccgagcaggactttccgctgcccaaggta
ctgatgcagtaccgctcgatgagcaagctgaaaagcacttacaccgatcgcctacctgag
caaatcaatccgcgtacggggcgaattcatacgtcctaccaccaggcggtcacggccacc
ggtcgtttgtcctctagtgatccaaacctgcagaacattccgattcgtaccgcagaaggt
cggcggattcgtcaggcgtttgtagcccctaaaggctacaaactgctggcggcggactac
tcgcaaatcgaattgcggatcatggcgcacctggccaaggacgaaggcctgctgcacgcc
ttccgcaacaatctggacgtgcacagcgccacggccgccgaggtattcggggttgagttg
gctgatgtgaccaccgaccagcgtcgcagcgccaaggcgatcaacttcggtctgatctac
ggcatgagtgcctttggcctggccaagcagatcggtgtcgaccgcaaacagtctcaggcc
tatatcgaccgctattttgcgcgctacccgggggtgctggactacatggagcggactcgc
acccaggccgccgagcaaggctatgtcgagaccattttcggtcgacgcctgtacctgccg
gaaatcaacgcgaaaaacccggcactgcgcaaaggtgccgagcgcacggcaatcaacgcc
ccgatgcagggcactgcggccgatatcatcaagaaagccatggtggctgtggataactgg
ctgagtgcgtctggcctggatgcccgcgtcatcctgcaggtacacgatgaattggtgctc
gaagtacgcgaagacctggtggatcaggtgcgcgatgaagtacgtgtacacatgagtgat
gcagccaagctcgatgtgccgctggtggtcgaagtgggtgtgggcaacaactgggatgag
gcgcactaa
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