Pseudomonas sp. ML2-2023-6: V6L79_04890
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Entry
V6L79_04890 CDS
T10713
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6L79_04890 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psmz02000
]
V6L79_04890 (choW)
Transporters [BR:
psmz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
V6L79_04890 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
WWT67308
LinkDB
All DBs
Position
complement(1066556..1067401)
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AA seq
281 aa
AA seq
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MLIDQKIPLGQYIARFVEWLTQNGASTFDAIALTLETMIHGVTFALTWFNPFVFIGLIAL
LAHFIQRKWGLTVFVALSFLLIFNLGYWQETMETLAQVLFATFVCVIIGVPLGILAAHKP
MFYTFMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVP
HELLDAGKAFGCSRRQLLTRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPV
VNALNTADIALGFEAGLAIVLLAIMLDRICKQPEAKAGADA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgatcaaaaaatccctctgggccagtacatcgcaaggtttgtcgagtggctg
acccaaaacggcgccagcaccttcgacgctattgcgctgacacttgaaacgatgatccac
ggcgtgacctttgcgctgacctggttcaacccgtttgtatttatcgggctgattgctctg
ctcgcgcactttattcagcgcaagtgggggctcactgtttttgtggcgctgtcgtttctg
ctgattttcaacctgggttattggcaagagacgatggaaaccctggcccaggtgctgttc
gctacctttgtgtgcgtgatcatcggcgtgccgctggggatactcgcggcgcacaaaccg
atgttctatacctttatgcggccagtgctcgacttgatgcagaccgtgcccaccttcgtt
tacctgatccctaccctgaccctgtttggcttgggtgtggtgccaggattgatatccacc
gtcgtgtttgcgattgccgcaccgatccgcctgacctacctgggcattcgtgatgtgccc
catgagctgcttgatgccggcaaggcctttggctgctcacggcgccaactgctcacccgt
attgaactgccccacgccatgccgagcatcgccgccggaatcacccaatgcatcatgctg
tcgctgtcgatggtggtcatcgcagcactggtaggggctgatgggctgggcaaacccgtg
gtcaacgcactgaatacagccgacatcgccctgggctttgaagccgggctcgcgattgta
ttgctggccatcatgctcgaccgaatctgcaagcagccagaagccaaagcaggagctgac
gcatga
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