KEGG   Pseudomonas sp. ML2-2023-6: V6L79_04985
Entry
V6L79_04985       CDS       T10713                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
psmz  Pseudomonas sp. ML2-2023-6
Pathway
psmz00260  Glycine, serine and threonine metabolism
psmz00460  Cyanoamino acid metabolism
psmz00630  Glyoxylate and dicarboxylate metabolism
psmz00670  One carbon pool by folate
psmz00680  Methane metabolism
psmz01100  Metabolic pathways
psmz01110  Biosynthesis of secondary metabolites
psmz01120  Microbial metabolism in diverse environments
psmz01200  Carbon metabolism
psmz01230  Biosynthesis of amino acids
psmz01240  Biosynthesis of cofactors
psmz04981  Folate transport and metabolism
Module
psmz_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:psmz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    V6L79_04985 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    V6L79_04985 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    V6L79_04985 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    V6L79_04985 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    V6L79_04985 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    V6L79_04985 (glyA)
Enzymes [BR:psmz01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     V6L79_04985 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: WWT67327
LinkDB
Position
1088881..1090134
AA seq 417 aa
MFSKQDQIQGYDDALLAAMNAEDQRQEDHIELIASENYTSQRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSQANAAVYLALLNAGDTVLGMS
LAHGGHLTHGASVSFSGKLYNAVQYGIDTATGLIDYDEVERLAVEHQPKMIIAGFSAYSK
FLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEALEKKFNSAVFPGGQGGPLMHVIAAKAVCFKEALEPGFKAYQQQVIDNAQAMAE
VFIKRGFDVVSGGTDNHLFLLSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCTQLAGWICDILDHLGDADIEADVARQVTSLCKDFPVYR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagcaagcaggatcagatccagggttacgacgatgccttgttagcggccatgaat
gccgaagatcagcgccaggaagatcacatcgagttgatcgcctccgagaactacaccagc
cagcgcgttatggaagcccaaggcagcggtctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggcggctgcgagcacgtggataaagtcgagcaactggccatcgac
cgcgccaagcaactgttcggcgccgattacgccaacgtgcagccgcactccggcagccag
gccaacgcggcggtgtatctggcgctgctgaatgccggtgacaccgtactgggcatgagc
ctggctcacggtgggcacttgacccacggcgccagcgtcagcttctccggcaagttgtac
aacgccgtgcagtacggtatcgacaccgctaccggtctgatcgactacgacgaagtggaa
cgcctggccgttgagcatcagccaaagatgatcattgccgggttctcggcttattccaaa
ttcctcgatttcccgcgctttcgtcagatcgctgacaaggtgggcgcctacctgtttgtc
gacatggcccacgttgccggtctggtggctgcggggctgtacccgaacccgctgccgtac
gccgatgtggtcaccaccaccactcacaaaaccctgcgcgggccacggggcgggctgatc
ctggccaaggccaacgaagcgctggagaaaaagttcaactcggcggtgttccctggtggt
cagggcggtccgttgatgcatgtgatcgcggccaaggcagtgtgctttaaagaggcgctg
gaacccggcttcaaggcgtatcaacagcaggttatcgacaacgctcaagccatggctgaa
gtgtttatcaaacgtgggttcgacgtggtctcgggcggtaccgacaaccatctgttcctg
ctcagcctgatccgtcagggcctgaccggcaaagacgccgatgctgcactgggccgcgcc
catatcacggtcaataaaaatgccgtgcccaacgatccgcaatcgcccttcgtgacctcg
ggcctgcgcattggcaccccggcggtgaccactcgcggtttcaaagtggcgcaatgcacg
cagttggcgggctggatctgcgacatcctcgatcacctcggcgatgccgatatcgaggcc
gacgtggcgcgccaggtgacctcgctgtgcaaagacttcccggtttatcgctga

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