Pseudomonas sp. ML2-2023-6: V6L79_05000
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Entry
V6L79_05000 CDS
T10713
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00260
Glycine, serine and threonine metabolism
psmz01100
Metabolic pathways
Module
psmz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6L79_05000
Enzymes [BR:
psmz01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
V6L79_05000
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
V6L79_05000
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_binding_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
HI0933_like
DAO
GIDA
FAD_binding_3
Thi4
AlaDh_PNT_C
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WWT67330
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All DBs
Position
1091751..1094768
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AA seq
1005 aa
AA seq
DB search
MSQTHRLPNGGRVDRSKVLTFTFNGQQYKGYEGDSLAAALLANGVDVIGRSFKYSRPRGI
YAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPNVNNDVMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTQNDPDTYDYMNHHCDVLIVGAGP
AGLAAALAAARSGARVIVADEQEEFGGSLLDSRESLDGKPAMEWVGKVIAELKELPSVTL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGACERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKMVLSTNNDHAYRVALDWLDAGQQVVAVADARSN
PRGALVEAARAKGIRILTSSAVIETRGSKHVTGARVAAIDLKSLSVASPGEWLECDLVAT
SGGYSPVVHLASHLGGKPTWREDILGFVPGEAPQKRVCVGGINGVYGLGDSLADGFEGGV
RAASEAGFKAVEGVLPKALNQLQEATLALFHVPHEKGTARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALQAWHVKQGAEFEDVGQWKRPWYFPRNGEDLHAAVKRECQA
VRDSVGILDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFVMTTTTGGAARVLQWLEIYQQTEWPELKVYFTSVTDHYATMTLSGPNSRKL
LSEVTDIDLDREAFPFMTWKEGLVGGVPARVFRISFTGELSYEVNIQADYAMGVLEKIVE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWLGWRGM
NREDCVRDQRKQLVGLKPVDPKQWLPEGAQLVFDPKQAIPMTMVGHVTSSYAHNSLGYSF
AMGVVKGGLKRIGERVFSPQADGSVIEAEIVSSVFFDPKGDRQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacccatcgcttgcctaatggcggccgtgtcgaccgcagcaaggtgctgacc
tttacgttcaacggtcaacaatacaaaggctacgagggcgacagcctggccgccgcgttg
ctggccaatggcgtcgacgtgattggtcgcagcttcaaatattcccggccccgtggcatc
tatgccgccggtgccgaagagcccaacgcggtgctgcaaatcggcgccaccgaagctacc
caaattcctaacgtgcgcgccacgcaacaggcgctgtatcagggcttggtcgccaccagc
accaacggctggcccaacgtcaacaacgatgtgatgggtattttgggcaaggtcggcggc
aagctgatgccgcctggcttctactacaaaacctttatgtacccgcagtcgttctggatg
acctacgagaagtacatccgcaaggcagcaggcctgggccgttcgccgacccagaacgat
cccgacacctacgactacatgaaccaccattgcgatgtgctgatcgtcggtgcaggccct
gcaggcttggcggcggctttggccgcagcgcgcagcggcgcccgagtgatcgttgcggat
gaacaagaagagttcggcggcagcctgctcgacagccgtgaaagcctggacggcaagccg
gcgatggaatgggtcggcaaagtcatcgctgaactcaaggaactgccgagcgtaactctg
ttgccacgggcgacagtcaacggctatcacgaccacaactttctgaccattcacgaacgc
ctcaccgaccacctcggcgaccgtgccccgattggccaggtgcgtcagcgtattcaccgg
gtacgggccaagcgcgtggtgttggccaccggtgcctgcgagcggccattggtgtacggc
aacaatgacgtgccgggcaacatgctggcgggcgcggtgtccacttatgtacgtcgctac
ggcgtagcgccaggcaaaaaaatggtgctcagtaccaacaacgaccacgcctaccgcgtc
gcgctggattggctcgatgccggtcagcaggtggtggctgtggctgatgcgcgcagcaac
cctcgtggcgcgctggtagaagcggcacgggccaaaggtatccgtattttgacctccagc
gcggtgatcgaaacccgtggcagcaagcatgtgaccggtgctcgggtggcggcgattgac
cttaaatccctcagtgtcgctagccccggcgagtggctggaatgcgatctggttgcgacc
tcgggcggctacagtccggtggtgcatctggcctcgcacttgggcggcaagccgacctgg
cgcgaagatattcttggttttgtacccggcgaagcaccgcaaaaacgtgtgtgcgtaggt
ggcatcaacggtgtttacgggttgggcgacagcctcgccgatggttttgaaggtggcgtg
cgtgctgccagcgaagccgggttcaaagcggtcgaaggggtattgcccaaagccctgaat
cagcttcaggaagccacgctggcgctgttccatgtaccccatgaaaagggcacggcgcgg
gcaccgaagcaatttgtcgacctgcaaaacgacgtaaccgccgcggccattgaactggca
acccgcgaaggcttcgagtcggtcgagcacgtcaaacgctacaccgcgctgggttttggt
accgaccagggcaagctgggcaacgtcaacgggctggccattgccgcgcgctcgctgaac
gtgaccatcccgcagatgggcaccaccatgttccgccccaactacacgccggtgaccttt
ggcgctgtagccggtcgccattgcgggcatattttcgagccggtgcgctacaccgcgctg
caagcctggcacgtcaagcagggcgccgagtttgaagacgtcggtcaatggaaacgtccg
tggtacttcccgcgtaacggcgaagacctgcacgcggcggtcaagcgcgagtgccaggca
gtgcgtgacagcgtcggcattctcgatgcttcgaccctgggcaaaatcgatattcaaggc
ccggacgcgcgggaattcctcaaccgcatctacaccaacgcctggaccaaactcgatgtg
ggcaaggcccgctatggcctgatgtgcaaagaagacggcatggtcttcgacgacggtgtg
accgcgtgcctggccgacaaccactttgtgatgaccaccaccaccggcggcgcagcgcgg
gtactgcaatggctggaaatctaccaacagaccgaatggcctgagctgaaggtgtatttc
acctctgtgaccgaccattacgcgacgatgactctgtccggccccaacagccgcaagctg
ctgagcgaagtcaccgatatcgatctggaccgtgaggccttcccgttcatgacctggaag
gaagggttggtgggcggtgtaccggcgcgggtgttccgaatctcgtttaccggcgagctg
tcgtacgaggtcaatatccaggctgactacgcgatgggtgtgctggagaaaatcgtcgag
gcgggcaagcaatacaacctcaccccgtatggcaccgagaccatgcacgtgctgcgggcc
gagaagggtttcatcatcgtcggccaggacacggacggctccatgaccccggacgatttg
aacatgggctggtgcgtgggccgcaccaaaccgttctcgtggctgggctggcgcggcatg
aaccgcgaagactgtgtgcgtgaccagcgtaaacagctggtgggcctcaaaccggtcgat
ccgaaacaatggctgccggagggcgcgcaactggtgttcgacccgaagcaggcaatcccg
atgacgatggtcggccacgtgacgtccagctatgcccacaactcactgggttattcgttt
gcaatgggtgtggtcaaaggcggtttgaagcgcatcggcgagcgggtgttctcgccccag
gccgacggtagcgtgatcgaggctgaaatcgtgtcttcggtgttcttcgatccgaaaggc
gaccggcaaaatatttga
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