Pseudomonas sp. ML2-2023-6: V6L79_05860
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Entry
V6L79_05860 CDS
T10713
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00900
Terpenoid backbone biosynthesis
psmz01100
Metabolic pathways
psmz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
V6L79_05860 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psmz01006
]
V6L79_05860 (ispA)
Enzymes [BR:
psmz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
V6L79_05860 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
V6L79_05860 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
V6L79_05860 (ispA)
Prenyltransferases [BR:
psmz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
V6L79_05860 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WWT67491
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All DBs
Position
complement(1266640..1267527)
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AA seq
295 aa
AA seq
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MIDAYQISSQARVNAALERLFVAPAPELERLFEAMHYSVMNGGKRVRPLLAYAACQALGG
APEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPQLNTLDADTRLRMVTALAQAAGPAGMVGGQAIDLGSVGIKLNQAALENMHRHK
TGALIEASVELGALASGNATAESLHALNTYSRAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALMGLEQAKGYALELRDQALNALRHFDAGAEPLRELARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgcgtaccagatcagcagccaggcccgggtcaatgcggcgcttgaacgcttg
tttgtcgctccggccccggagctggaacgcctgtttgaggccatgcactacagcgtcatg
aatggtggcaaacgggttcgtccgctgctggcctatgccgcttgccaagcgctgggcggc
gcgccggagcaagccaatggcgcggcctgtgcagttgagctgatccacgcctattcgctg
gtgcatgatgatttgcccgcaatggatgatgacgatctgcgccgcggccagccgaccacc
cataaagcttttgacgaagcctgcgccattctggccggtgacggcctgcaaagcctggcg
ttcagcgccctgctcgacccgcaactgaacaccctggacgctgacacgcgcttgcgcatg
gtcaccgccctcgcccaggccgcaggcccggcgggcatggtcggcggccaagccattgac
ctcggttcggtcggcatcaagctcaatcaggcggcgctggaaaacatgcaccgccacaag
accggagccctgatcgaggccagcgtagaactaggcgccctggccagcggcaacgcgact
gccgaaagcctgcacgccttgaacacctactcacgagccattggcctggcatttcaagtt
caggacgacattctggatgttgaaagcgataccgccacgctgggcaaacgccagggcgcc
gatatcgcacgggacaaaccaacctatccggcgctaatgggcctggaacaggccaaaggc
tatgcactggaactgcgcgatcaggcactcaatgccctgcggcattttgatgcaggcgct
gagccgctgcgtgaactggcgcgatatatcgtggagcgccgccactga
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