Pseudomonas sp. ML2-2023-6: V6L79_05890
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Entry
V6L79_05890 CDS
T10713
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00010
Glycolysis / Gluconeogenesis
psmz00020
Citrate cycle (TCA cycle)
psmz00260
Glycine, serine and threonine metabolism
psmz00280
Valine, leucine and isoleucine degradation
psmz00310
Lysine degradation
psmz00380
Tryptophan metabolism
psmz00620
Pyruvate metabolism
psmz00630
Glyoxylate and dicarboxylate metabolism
psmz00640
Propanoate metabolism
psmz00670
One carbon pool by folate
psmz00785
Lipoic acid metabolism
psmz01100
Metabolic pathways
psmz01110
Biosynthesis of secondary metabolites
psmz01120
Microbial metabolism in diverse environments
psmz01200
Carbon metabolism
psmz01210
2-Oxocarboxylic acid metabolism
psmz01240
Biosynthesis of cofactors
Module
psmz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psmz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psmz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
psmz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
psmz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
V6L79_05890 (lpdA)
00020 Citrate cycle (TCA cycle)
V6L79_05890 (lpdA)
00620 Pyruvate metabolism
V6L79_05890 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
V6L79_05890 (lpdA)
00640 Propanoate metabolism
V6L79_05890 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6L79_05890 (lpdA)
00280 Valine, leucine and isoleucine degradation
V6L79_05890 (lpdA)
00310 Lysine degradation
V6L79_05890 (lpdA)
00380 Tryptophan metabolism
V6L79_05890 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
V6L79_05890 (lpdA)
00670 One carbon pool by folate
V6L79_05890 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psmz04147
]
V6L79_05890 (lpdA)
Enzymes [BR:
psmz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
V6L79_05890 (lpdA)
Exosome [BR:
psmz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
V6L79_05890 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
GIDA
HI0933_like
FAD_oxidored
DAO
NAD_binding_8
Lycopene_cycl
Lys_Orn_oxgnase
AlaDh_PNT_C
3HCDH_N
Thi4
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WWT67497
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All DBs
Position
1274299..1275696
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AA seq
465 aa
AA seq
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MTDKFDVVVIGGGPGGYVAAIRAAQLGLSTALVEQQHLGGICLNWGCIPTKAMLKGAEVG
HTLKHLGTFGFSAENVQFDIAQLVAHSRGVSQRLTTGIAYLLKKNAVTVIDGRGRVTAKG
VVTVSAEQGDQVLQARHIILATGARPRPLPGLAADGQKIWSYFEALVPKSVPPSLLVIGS
GAIGVEFASLYSDLGSQVTLVEVAKQIMPVEDQDVASLVQREFEQRGIRVLTQARVNSVH
GDVGALQCQVVLSDGREQTLHVAQVLLAAGIEPNTQDMGLEALGVEFEKGFIKTDPWCRT
SVAGLYAIGDVAGAPCLAHKASHEGVLCVEKLAGVEGVHPLDKSRIPGCTYARPEVASLG
LTEAAARANGHNIAVGRFDYQANGKALAMGEGIGFVKTIFDAHSGELLGAHMVGPHVTEQ
IQGFGIAQTLEATDVELSQVIFAHPTLSEAMHEAVLAARDRALHQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaatttgatgtggtcgtcatcggcggcggccccggtggctatgtcgcggct
attcgcgccgcacagctggggctcagcaccgcgctggtcgagcagcagcacctgggcggc
atctgcctgaactggggctgcattcccaccaaggcaatgctcaaaggggccgaagtcggg
cataccttgaagcacctgggcacctttggtttcagcgcagaaaacgtccagttcgatatc
gcccaactggtggcccacagccgtggggtgtcgcaacgcctcacgacggggattgcttac
ctgttgaaaaaaaacgccgtcactgtgatcgatggtcgtggtcgcgtcaccgccaaaggc
gtggtgacggtgagcgccgagcagggcgatcaggtgctgcaggcgcgacatatcatcctg
gccactggtgcccgccccagaccgttacccggtctggccgccgatgggcaaaaaatctgg
agctactttgaggcgctggtgcccaaaagcgtaccgccgtcactgctggtgatcggctcc
ggggccattggcgtggagttcgccagcctgtacagcgatctgggcagccaggtcacgctg
gtcgaagtggccaaacaaatcatgccggtcgaggatcaggacgtggccagcctggtacag
cgtgagttcgaacaacgggggattcgtgtgctgactcaagcacgagtcaacagcgtgcat
ggggacgtcggtgcactgcaatgtcaggtcgtgctcagtgatggccgtgagcagaccttg
cacgtagcgcaggtattactcgcggccgggatcgagcccaatacccaggacatgggccta
gaagcactgggcgtggagtttgaaaaaggctttatcaaaaccgacccgtggtgccgcacc
agtgttgccgggctgtatgccatcggcgacgtggccggggcaccgtgcctggcgcacaag
gccagccatgaaggcgtgctatgcgtagaaaaactggcgggagtagaaggcgtacatcca
ctggataaaagccgtatccccggctgcacctatgcccggccagaggttgccagcctcggg
ctgaccgaagcggcagccagggccaacggccataacatcgcagtcgggcgcttcgactat
caggccaacggcaaggcgctggccatgggcgaaggcataggttttgtgaaaaccatcttt
gacgcgcacagcggcgaattgctcggcgcccatatggtcggcccgcacgtgaccgaacag
atccagggcttcggcattgcgcaaaccctcgaagccaccgacgtggaattgagccaggtc
atctttgcccaccccacgctcagcgaagccatgcacgaagcggtgctggcggcacgggac
cgtgccctgcatcaataa
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