KEGG   Pseudomonas sp. ML2-2023-6: V6L79_05890
Entry
V6L79_05890       CDS       T10713                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
psmz  Pseudomonas sp. ML2-2023-6
Pathway
psmz00010  Glycolysis / Gluconeogenesis
psmz00020  Citrate cycle (TCA cycle)
psmz00260  Glycine, serine and threonine metabolism
psmz00280  Valine, leucine and isoleucine degradation
psmz00310  Lysine degradation
psmz00380  Tryptophan metabolism
psmz00620  Pyruvate metabolism
psmz00630  Glyoxylate and dicarboxylate metabolism
psmz00640  Propanoate metabolism
psmz00670  One carbon pool by folate
psmz00785  Lipoic acid metabolism
psmz01100  Metabolic pathways
psmz01110  Biosynthesis of secondary metabolites
psmz01120  Microbial metabolism in diverse environments
psmz01200  Carbon metabolism
psmz01210  2-Oxocarboxylic acid metabolism
psmz01240  Biosynthesis of cofactors
Module
psmz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
psmz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psmz_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
psmz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
psmz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:psmz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    V6L79_05890 (lpdA)
   00020 Citrate cycle (TCA cycle)
    V6L79_05890 (lpdA)
   00620 Pyruvate metabolism
    V6L79_05890 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    V6L79_05890 (lpdA)
   00640 Propanoate metabolism
    V6L79_05890 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    V6L79_05890 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    V6L79_05890 (lpdA)
   00310 Lysine degradation
    V6L79_05890 (lpdA)
   00380 Tryptophan metabolism
    V6L79_05890 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    V6L79_05890 (lpdA)
   00670 One carbon pool by folate
    V6L79_05890 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psmz04147]
    V6L79_05890 (lpdA)
Enzymes [BR:psmz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     V6L79_05890 (lpdA)
Exosome [BR:psmz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   V6L79_05890 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA HI0933_like FAD_oxidored DAO NAD_binding_8 Lycopene_cycl Lys_Orn_oxgnase AlaDh_PNT_C 3HCDH_N Thi4 FAD_binding_3
Other DBs
NCBI-ProteinID: WWT67497
LinkDB
Position
1274299..1275696
AA seq 465 aa
MTDKFDVVVIGGGPGGYVAAIRAAQLGLSTALVEQQHLGGICLNWGCIPTKAMLKGAEVG
HTLKHLGTFGFSAENVQFDIAQLVAHSRGVSQRLTTGIAYLLKKNAVTVIDGRGRVTAKG
VVTVSAEQGDQVLQARHIILATGARPRPLPGLAADGQKIWSYFEALVPKSVPPSLLVIGS
GAIGVEFASLYSDLGSQVTLVEVAKQIMPVEDQDVASLVQREFEQRGIRVLTQARVNSVH
GDVGALQCQVVLSDGREQTLHVAQVLLAAGIEPNTQDMGLEALGVEFEKGFIKTDPWCRT
SVAGLYAIGDVAGAPCLAHKASHEGVLCVEKLAGVEGVHPLDKSRIPGCTYARPEVASLG
LTEAAARANGHNIAVGRFDYQANGKALAMGEGIGFVKTIFDAHSGELLGAHMVGPHVTEQ
IQGFGIAQTLEATDVELSQVIFAHPTLSEAMHEAVLAARDRALHQ
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaccgataaatttgatgtggtcgtcatcggcggcggccccggtggctatgtcgcggct
attcgcgccgcacagctggggctcagcaccgcgctggtcgagcagcagcacctgggcggc
atctgcctgaactggggctgcattcccaccaaggcaatgctcaaaggggccgaagtcggg
cataccttgaagcacctgggcacctttggtttcagcgcagaaaacgtccagttcgatatc
gcccaactggtggcccacagccgtggggtgtcgcaacgcctcacgacggggattgcttac
ctgttgaaaaaaaacgccgtcactgtgatcgatggtcgtggtcgcgtcaccgccaaaggc
gtggtgacggtgagcgccgagcagggcgatcaggtgctgcaggcgcgacatatcatcctg
gccactggtgcccgccccagaccgttacccggtctggccgccgatgggcaaaaaatctgg
agctactttgaggcgctggtgcccaaaagcgtaccgccgtcactgctggtgatcggctcc
ggggccattggcgtggagttcgccagcctgtacagcgatctgggcagccaggtcacgctg
gtcgaagtggccaaacaaatcatgccggtcgaggatcaggacgtggccagcctggtacag
cgtgagttcgaacaacgggggattcgtgtgctgactcaagcacgagtcaacagcgtgcat
ggggacgtcggtgcactgcaatgtcaggtcgtgctcagtgatggccgtgagcagaccttg
cacgtagcgcaggtattactcgcggccgggatcgagcccaatacccaggacatgggccta
gaagcactgggcgtggagtttgaaaaaggctttatcaaaaccgacccgtggtgccgcacc
agtgttgccgggctgtatgccatcggcgacgtggccggggcaccgtgcctggcgcacaag
gccagccatgaaggcgtgctatgcgtagaaaaactggcgggagtagaaggcgtacatcca
ctggataaaagccgtatccccggctgcacctatgcccggccagaggttgccagcctcggg
ctgaccgaagcggcagccagggccaacggccataacatcgcagtcgggcgcttcgactat
caggccaacggcaaggcgctggccatgggcgaaggcataggttttgtgaaaaccatcttt
gacgcgcacagcggcgaattgctcggcgcccatatggtcggcccgcacgtgaccgaacag
atccagggcttcggcattgcgcaaaccctcgaagccaccgacgtggaattgagccaggtc
atctttgcccaccccacgctcagcgaagccatgcacgaagcggtgctggcggcacgggac
cgtgccctgcatcaataa

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