Pseudomonas sp. ML2-2023-6: V6L79_06140
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Entry
V6L79_06140 CDS
T10713
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psmz03016
]
V6L79_06140 (miaB)
Enzymes [BR:
psmz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
V6L79_06140 (miaB)
Transfer RNA biogenesis [BR:
psmz03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
V6L79_06140 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
WWT67544
LinkDB
All DBs
Position
complement(1324946..1326274)
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMINAARL
TKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLAEVIHLAENGVREVTLLGQNVNGYRGLTEGGRLADLAELIRVVAAIDGIERIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILSAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFEQTMKLIEDVGFDFSYSFVYSQRPGTPAADLADDTPEERKKE
RLNALQHRLNQQGFEISRQMVGSIQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPQLI
GQFADVHIDAAQPHSLRGSLLN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaatgagtacgacagctcg
cgcatggtcgacctgctgggtgaacatcaggccctggaagtcacggcgcgcgccgaagac
gctgatgtcatcctgcttaatacctgctcgatccgtgagcgagcccaggaccgcgtgtac
tcgcaactgggccgctggcgtgagctgaaattggccaaccccgacatggtgattgccgtg
ggcggctgtgttgccagccaggaaggtgcggcgatccgtgatcgcgccccttacgtggac
gtggttttcggcccgcagaccctgcaccgcctaccggaaatgatcaacgctgctcgcctc
accaagctgccgcaggtcgatgtgtcgttccctgaaatcgaaaagttcgaccatctgcca
gaaccgcgtatcgatggcccaagtgcctatgtctcggtgatggaaggttgcagcaagtac
tgcacgttctgcgtggtgccttacacccgcggcgaagaagtcagccgcccgtttgatgac
gtattggccgaggtgattcacctggctgaaaacggcgtgcgcgaagtcaccctgctgggc
cagaacgtaaacggctatcgcggtctgaccgaaggcggccgtctggcggatctggccgag
ctgattcgggtagtggccgcaatcgacggcatcgagcgcatccgttacaccacctctcac
ccgctggagttctccgacagcctgatccaggctcacgctgaggttccggagctggtcaag
cacctgcacttgccggtgcaatcgggctcggaccgcatcctgtcggcgatgaagcgcaac
cacacggctctggaatacaaatccaagctacgtaaactgcgcgcggccgtaccgggcatc
tgcatcagttccgacttcattgtcggtttccctggcgagaccgaaaaagacttcgaacag
accatgaagctgatcgaagacgtgggcttcgacttttcctactcgtttgtctacagccag
cgcccgggcaccccagcagcagatttggctgacgacacgccagaagagcgcaaaaaagag
cgtttgaacgcgctgcaacatcgcctcaaccagcagggttttgagatcagtcgccaaatg
gtcggctccatccagcggattctggtgacggactactcgaagaaagaccctggcgaactg
cagggccgcaccgagaacaaccgcatcgttaacttccgctgcgacaacccgcagctgatc
gggcaattcgccgacgtacacattgatgcagcccaaccgcactcgttacgtggatcgttg
ctgaactga
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