Pseudomonas sp. ML2-2023-6: V6L79_06400
Help
Entry
V6L79_06400 CDS
T10713
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz03030
DNA replication
psmz03430
Mismatch repair
psmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6L79_06400
03430 Mismatch repair
V6L79_06400
03440 Homologous recombination
V6L79_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmz03032
]
V6L79_06400
03400 DNA repair and recombination proteins [BR:
psmz03400
]
V6L79_06400
Enzymes [BR:
psmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6L79_06400
DNA replication proteins [BR:
psmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6L79_06400
DNA repair and recombination proteins [BR:
psmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6L79_06400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Oxidored_nitro
DUF8678
RNase_H_2
DUF1059
Motif
Other DBs
NCBI-ProteinID:
WWT67592
LinkDB
All DBs
Position
1383543..1384154
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVILERGRIVERYQSLMNAGVRVPGFIEQLTGIS
NAMLRTAPSAEQVMNEVNEFVGITPLLAHNAAFDQKFWDFEMGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFADLPHTGQAHRAMADAEMAANLTAHLAQQLRQKHGLKELNHD
LLCGLQKVPAAKINEHLKRYRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcattgcggtaattgactttgaaaccaccggtatctccccgagcagcagttgc
cgggccaccgaaattgccgtggtgattcttgagcgtgggcgcattgtcgagcgttaccaa
agcctgatgaacgcaggcgtgcgcgtgccggggtttattgaacagttgaccggtatcagc
aacgccatgctgcgcaccgcgccgtcggccgagcaggtgatgaacgaagtcaacgagttc
gttggcatcacaccactgctggcccacaacgcggcctttgaccaaaaattctgggatttc
gaaatgggccgcatcaagcgcacccgtttgcagaacttcgcctgctccttgttgctggcg
cgccgcctgatgcctgcggcgccgaatcataagctcggcaccctgaccacctttgccgat
ttgccccacaccggccaggctcaccgggccatggccgatgctgaaatggcggccaatctg
actgcacacctggcccagcaactgcgccagaagcacggcttgaaagaactcaatcacgac
ctgctgtgcggcctgcaaaaagtccctgcggcgaagatcaacgagcatctgaagcgttat
cgcgggttttaa
DBGET
integrated database retrieval system
