Pseudomonas sp. ML2-2023-6: V6L79_06980
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Entry
V6L79_06980 CDS
T10713
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00330
Arginine and proline metabolism
psmz00480
Glutathione metabolism
psmz01100
Metabolic pathways
psmz01110
Biosynthesis of secondary metabolites
psmz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
V6L79_06980
09106 Metabolism of other amino acids
00480 Glutathione metabolism
V6L79_06980
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
V6L79_06980
Enzymes [BR:
psmz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
V6L79_06980
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WWT67699
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Position
complement(1510641..1511804)
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AA seq
387 aa
AA seq
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MSIQIEDYYARDTFNKMKAFADTQETPFVVIDTAMISKAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLRDKGSNFDIASIYELDKVMAQGVGPDRISYGNTIKKSKDIRYFYEKGVRLFS
TDSEADLRNIAKAAPGSKIYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcagatcgaagactattacgcgcgcgataccttcaacaaaatgaaggctttc
gctgacacccaggaaactccgttcgtggtgatcgacaccgccatgatcagcaaggcttac
gatgacctgcgtgcaggcttcgaattcgccaaggtgtactacgccgtcaaagccaacccg
gccgtcgaaatcatcgacttgctgcgcgacaagggttcgaacttcgacatcgcgtcgatc
tacgaactggacaaagtgatggcccaaggcgttggcccggatcgcatcagctacggcaac
accatcaagaaatccaaagacatccgttatttctacgagaaaggcgtgcgcctgttctcc
accgactccgaagccgacctgcgcaacattgccaaggctgcaccgggttcgaaaatctac
gtgcgtattctgaccgaaggctcgaccactgctgactggcctttgtcgcgcaaattcggc
tgccagaccgacatggccatggacctgctgatcctggctcgcgacctgggcctggtgcct
tacggcatttcgttccacgtgggctcccagcaacgcgacatcagcgtttgggatgccgcg
atcgccaaggtcaaagtgatctttgaacgtttgaaagaagaagacggcatcgtcctcaag
ctgatcaacatgggcggcggcttcccggccaactacattacccgtaccaacagcctggaa
acttacgccgaagaaatcatccgtttcctcaaggaagacttcggcgacgacctgccagaa
atcatcctggaaccaggccgctcgctgatcgccaacgccggtattttggtcagcgaagta
gtactggttgcgcgtaagtcgcgcaccgccgttgagcgttgggtatacaccgacgtgggc
aaattctctggcctgatcgaaaccatggacgaagccatcaagttcccgatctggactgaa
aagaaaggtgaaatggaagaagtcgtaatcgccggtccaacctgcgacagcgccgacatc
atgtacgaaaactacaagtacggcctgccactgaacctggccatcggtgaccgcctgtac
tggttgtcgaccggtgcctacaccaccagttacagcgctgttgagttcaatggcttcccg
ccgttgaagtcgttctacctgtaa
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