Pseudomonas sp. ML2-2023-6: V6L79_07940
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Entry
V6L79_07940 CDS
T10713
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
V6L79_07940 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmz03400
]
V6L79_07940 (xseA)
Enzymes [BR:
psmz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
V6L79_07940 (xseA)
DNA repair and recombination proteins [BR:
psmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
V6L79_07940 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4807
Motif
Other DBs
NCBI-ProteinID:
WWT67875
LinkDB
All DBs
Position
complement(1707003..1708382)
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AA seq
459 aa
AA seq
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MIKDPFARLNLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRNSAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSPERKVALPAHPQRIGIISSPTGAVIRDIISVFRRRAPQVELTLIPT
AVQGREATAQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAIDACVTPIVSA
VGHETDVSIADFVADVRAPTPSAAAELLAPDSSDLQRRIDSLHRRLVMRIRDRLMRDRLR
LDGLARRLRHPGERLRQQAQRLDDLDMRMRRAFERSLNTRRERLIRLETRLAAQHPGRQL
SMLRQRLDSLAERLPRAMREGLKARRLQLQSQMQTLHVVSPLATLGRGYSILLDERGNAI
RSAGQTHNGQRLKAKLGEGELQVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagacccctttgcaagactcaacctcgaccgagaagtcctgaccgtcagccag
ctcaatggccgggcgcgggtgttgctcgaagacgtgttcagcaacatctgggttgaaggc
gaaatatccaacctcgcccgcccggcctctggccatgtgtatttcaccctcaaggacagt
ggcgcccaggtgcgttgcgcactgttccgcaatagcgctgcgcgggtgcgccaggccttg
aaagacggcctggcggtcaaggttcgcggcaaggtgtcgttgtttgaagggcgtggcgac
taccaactgatcctcgacactgtagagcccgcaggcgatggtgcgctgcgcctggcgttc
gatgcgctgaaagaaaaactcagcgccgaaggcctgttcagccccgaacgcaaagtcgcc
ctgcccgctcacccgcaacgcatcggaattatcagttcgccaacgggcgcggtgattcgc
gacatcatcagcgtgtttcgccgcagggccccgcaagtcgaactgaccctgatccccacc
gccgtacaaggccgagaagcgacggcgcagattgtccgcgccttgaagctggccgatgca
cgcggcttcgacgcactgattctggcccgcggtggcggctcgctggaagacctgtggtgc
tttaacgaagaagccgtggcccgcgccattgatgcctgtgtgacgccaatcgtcagtgct
gtaggtcacgaaaccgatgtctccattgccgacttcgtggctgacgtacgggcgccaacg
ccgtctgcggccgcagagttgctggcaccggactccagcgatctgcaacggcgtatcgac
agcctgcaccgacgtctggtgatgcgcattcgcgaccgcttgatgcgcgaccgcctgcgc
ctcgacggcctggcccgtcgcttgcgtcaccccggcgaacgcctgcgccagcaagcccaa
cgcctggatgatctggacatgcgcatgcgccgcgctttcgaacgcagcctcaatacccgc
cgcgaacgtctgatccgcctcgaaacccgcctcgcggcgcagcatccgggccgccagctg
agcatgctgcgccagcgcctggacagcctcgccgagcgcttgccccgggccatgcgcgaa
gggctgaaagcacggcgcctacaactgcaaagtcagatgcaaaccctgcatgtggtcagc
ccgctggcgactcttggccgcggttacagcatcttgttggatgaacgcggcaacgccatt
cgcagcgccgggcagacccataacggtcagcgtttgaaggccaaactgggcgaaggcgag
ctgcaagtccgcgttgaggacaatcacctcacgcccgtcaccctctctttactggattaa
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