Pseudomonas sp. ML2-2023-6: V6L79_08790
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Entry
V6L79_08790 CDS
T10713
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6L79_08790 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psmz03019
]
V6L79_08790 (groL)
03110 Chaperones and folding catalysts [BR:
psmz03110
]
V6L79_08790 (groL)
03029 Mitochondrial biogenesis [BR:
psmz03029
]
V6L79_08790 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psmz04147
]
V6L79_08790 (groL)
Enzymes [BR:
psmz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
V6L79_08790 (groL)
Messenger RNA biogenesis [BR:
psmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
V6L79_08790 (groL)
Chaperones and folding catalysts [BR:
psmz03110
]
Heat shock proteins
HSP60 / Chaperonin
V6L79_08790 (groL)
Mitochondrial biogenesis [BR:
psmz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
V6L79_08790 (groL)
Exosome [BR:
psmz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
V6L79_08790 (groL)
Exosomal proteins of other body fluids (saliva and urine)
V6L79_08790 (groL)
Exosomal proteins of breast cancer cells
V6L79_08790 (groL)
Exosomal proteins of colorectal cancer cells
V6L79_08790 (groL)
Exosomal proteins of bladder cancer cells
V6L79_08790 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
WWT68034
LinkDB
All DBs
Position
1901771..1903414
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKSLAKPCADSKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMTAELDGPLILLVDKKISNIRELLPVLEAV
AKAGRPLLIVSEDVEGEALATLVVNNMRGIVKVVAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESATLEHLGNAKRVTVTKENTTVIDGAGVEADIQARVTQIRAQVADTTSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAIADLKGDNADQNVGIALLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIQDDKAAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgactccgcccgtaaaaaaatgctggccggtgtt
aacgtcctggctgacgcagtaaaagcgaccctgggccctaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgttgccaaagaaatc
gagctgaaagatcgcttcgaaaacatgggcgcgcagctggttaaagacgttgcctcccgt
gccaacgatgacgctggtgacggtactaccactgcaaccgttctggctcaatcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaagcgcggtatc
gacaaagcgaccatcgccattgtcaaagagctgaaatccctggccaagccatgtgctgac
agcaaggcaatcgctcaggtaggtactatctctgccaactccgacagctccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcactgttgaagaaggc
tcgggcctggaaaacgaactgtctgttgttgaaggcatgcagtttgaccgtggctacctg
tccccgtacttcgtcaacaaaccagaaaccatgactgccgaactcgacggtcctctgatc
ctgctggtcgacaaaaagatctccaacatccgtgaactgctgccagttctggaagctgtt
gccaaagctggtcgcccactgctgatcgtatccgaagacgttgaaggcgaagccttggcg
actctggttgtgaacaacatgcgcggtatcgtgaaagtggttgctgttaaagcacctggc
ttcggcgatcgtcgcaaggcaatgctgcaggacatcgctgttctgactggcggtaccgtt
atctccgaagagatcggtctgagcctggaaagcgctaccctggaacacctgggtaatgcc
aaacgcgtcaccgtaaccaaagaaaacaccaccgttatcgacggtgccggtgttgaagct
gacatccaggctcgtgtgactcagatccgtgcccaggtagctgacaccacttcggactac
gaccgtgaaaaactgcaagagcgtctggccaagctgtctggcggcgttgcagtgatcaag
gttggcgctggttccgaagtagaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaactcgtgcagccgttgaagaaggcgtggtacctggcggtggcgtggcactggtt
cgcgctctgcaggccattgctgatctgaaaggcgacaacgctgatcagaacgttggtatc
gcattgctgcgtcgtgctgttgaagcacctctgcgccagatcgttgccaactccggtgac
gagccaagcgtagttgtcgacaaggttaagcagggttcgggtaactacggttacaacgca
gccactggcgaatacggcgacatgatcgaaatgggtatccttgacccagctaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccactgaggcgatg
atcgctgagatccaggacgacaaggcagctggcggcggtatgccagacatgggcggcatg
ggtggtatgggcggcatgatgtaa
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