Pseudomonas sp. ML2-2023-6: V6L79_09550
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Entry
V6L79_09550 CDS
T10713
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00541
Biosynthesis of various nucleotide sugars
psmz01100
Metabolic pathways
psmz01250
Biosynthesis of nucleotide sugars
Module
psmz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
V6L79_09550 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psmz01005
]
V6L79_09550 (kdsB)
Enzymes [BR:
psmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
V6L79_09550 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
psmz01005
]
Lipid A
V6L79_09550 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
adh_short_C2
DUF2064
Motif
Other DBs
NCBI-ProteinID:
WWT68168
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Position
2061660..2062424
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AA seq
254 aa
AA seq
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MIPVFTVVIPSRYASTRLPGKPLQMIAGKPMVQHVWEQACKSSAQRVVVATDDARIVEAC
KAFGAEVLLTRADHESGTDRLAEVATQLGLADDAIVVNVQGDEPMIPPQVIDQVAVNLAA
HSEASMATLAEPIDDVETLFNPNVVKVVSDINGLALTFSRATLPWARDDFAQHPDKLPAG
VPYRRHIGIYAYRAGFLHDFVSWGPCWLENTERLEQLRALWHGVRIHVADVLEAPPAGVD
TVEDLERVRRLLES
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgattccggttttcacagttgttatcccgtcgcgctatgcctcgacccgtttgccaggc
aagccgctgcaaatgatcgccggcaagccgatggtccagcacgtctgggagcaagcctgt
aaaagcagcgcgcagcgggtggtggttgccactgacgatgcgcgcatcgtcgaggcctgc
aaggcgtttggcgccgaggtgctgctgacccgtgccgatcacgagtccggtactgaccgc
ctggccgaagtggccacgcagttgggcttggctgacgatgccatcgtggtcaatgtccag
ggcgacgagccgatgattccgccgcaggtgattgatcaggttgccgtcaacctggccgcc
cacagcgaagcgagcatggcgactctggccgagccgatcgacgatgtcgagaccctgttc
aatcccaatgtggtcaaggtggtcagtgacatcaatgggctggcgctgacattcagccgg
gccacgttgccgtgggcacgggatgatttcgctcaacacccggacaaactgccagccggc
gtgccctatcgtcggcatatcggcatctacgcctatcgtgcaggcttcctgcatgacttc
gtgagctgggggccttgctggcttgaaaataccgagcgtctggagcaactgcgagcgctg
tggcatggcgtgcgcattcacgtggctgatgtgcttgaggccccgcctgccggagtggat
accgtagaagacctcgagcgcgttcggcgcttactggagtcatga
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