Pseudomonas sp. ML2-2023-6: V6L79_10155
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Entry
V6L79_10155 CDS
T10713
Name
(GenBank) DEAD/DEAH box helicase
Organism
psmz Pseudomonas sp. ML2-2023-6
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
WWT68285
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Position
complement(2186070..2188772)
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AA seq
900 aa
AA seq
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MPLSQTPRLTKPLAPTWVSRFKEQSLERGRRYAKENRVRIVQIGDSMINASCQGSGENTY
RQTIHLRESAKGTLLLVDATCTCPVRTNCKHTAAVLLKIEETLNYPAAAQDAELLEKLQA
VLDSRRPNNLPEQLVDDVQPVPRLWLASAEFSAFEPRNGKMQRYIQHRAALSFNYLDQYV
SGQKNTDILLRQEQQTLRIKRQPDTENVYREQLRSLGFKIATRQSKALPESAGELFELVN
DSAWLNFTLNQMQALREQGWELQIDEGFGFDLSPVEDWYANVDEAPERDWFDLELGIIVN
GRHLSLLPILLNLMRSHNDILNPEKLARRRDDELILVNIPANPGSGHGALQVALPFGRLK
PVLATLDEFYLGEPDATSLRIKSADALRLNALDALPLRWEGGEQIRGFAQRLRDIKDFSV
EVPEGLNANLRPYQLEGLSWMQSLRQLEVGGVLADDMGLGKTLQTLAHILCEKNAGRLDR
PAMVVMPTSLIPNWLDEAAHFTPQLKVLALYGATRKKHFAHLNDYDVILTTYALLPKDIE
HLAKLPLHLLVLDEAQYIKNPGSKATQAACELVARQRLCLSGTPLENHLGELWSLFHFLL
PGWLGDVKTFNRDYRVPIERQGSAERLQHLNARIKPFLLRRTKEQVATELPPKTEIIHWV
DLNEAQRDVYETMRLAMDKKVRDEITRKGVGRSQIIILEALLKLRQVCCDLRLVSDTAPK
KGSTSGKLDSLMLMLEELFAEGRRILLFSQFTSMLALIEIELKKRNVRYAILTGQTRDRR
APVKDFQSGTLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPAAENQATDRAYRIGQEKP
VFVYKMIARGTVEEKIQHLQQEKSDLAAGVLDGRIAGDWKLQDDDIDALFAPLPPKTEKR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgagccagacaccccgactgaccaagccgctcgcaccgacttgggtcagtcgc
ttcaaagaacaaagccttgagcgtggccgccgctacgccaaggaaaaccgcgtcagaatc
gtccagatcggcgacagcatgatcaacgccagctgtcagggctcaggcgaaaacacctac
cgtcagaccatacatttacgcgaatccgccaaaggcactctgctgttggtggacgcaacc
tgcacctgcccggtacgcaccaattgcaagcacaccgctgccgtcttattgaagattgaa
gaaaccttgaactaccctgccgccgctcaggatgccgagcttctggagaaactccaggcc
gtactcgactcacgtcgccccaacaacctgcccgagcaattggtcgacgatgtccagcca
gtgccacgcctgtggctggccagcgccgagttcagcgccttcgaaccgcgcaacggcaag
atgcaacgctatatccagcaccgcgccgcattgtcgttcaactacttggaccagtacgtc
agcgggcaaaaaaacaccgacattctgctgcgccaggaacagcagaccctacggatcaaa
cgccagccagacaccgaaaatgtctaccgagagcagttgcgcagcctgggcttcaaaatt
gccacccgccagagcaaggcgctacccgaaagtgccggcgagctgtttgagctggtcaat
gacagtgcctggctgaatttcaccctcaaccagatgcaagccctgcgcgaacaaggctgg
gagttgcagatcgatgagggcttcggctttgacctgagcccggtcgaagactggtacgcc
aatgtcgatgaagccccggagcgtgactggttcgacctggaactggggattatcgtcaac
ggccgccacctgagcctgctgccgatactgctgaacctgatgcgctcccacaacgacatc
ctcaacccggagaaacttgcccggcgccgagatgacgaactgattctggtaaacattccg
gccaaccctggcagcggccacggcgcgctgcaagttgccttgccgtttgggcgtttgaag
ccagtactcgcaaccctggacgagttctatctgggcgagccggatgccacctcgctgcga
atcaaaagcgccgacgcgctgcgcctcaacgctctggatgccctgcccttgcgctgggaa
ggtggtgagcagattcgcggctttgcccagcgcctgcgtgacatcaaggacttcagcgtc
gaagtgcccgagggcctcaacgccaacctgcgcccctaccaactcgaagggctgagctgg
atgcagtcgctgcgccagcttgaggtcggtggcgtgctggctgacgacatgggcctgggc
aaaaccctgcagaccctggcgcatattctgtgcgaaaaaaacgcgggtcgcctggatcgc
ccggccatggtggtgatgcccaccagcctgatccccaactggctcgacgaggccgcgcac
ttcaccccgcagctcaaggtgctggcgctgtatggcgccacccgcaaaaaacactttgcg
cacctcaatgactacgacgtaatcctgaccacctacgctttgctgcccaaggacatcgag
cacctggccaaactgcccttgcacttgctggtgctggacgaagcccaatacatcaagaac
ccaggcagcaaggccacccaggctgcctgcgagctggttgcgcggcaacgcctgtgcctg
agtggcacaccactggaaaaccacttgggcgagttatggtcgctgttccacttcctgctc
cccggctggctgggcgacgttaaaaccttcaatcgcgactaccgggtgcccatcgaacgc
cagggcagcgccgaacgcctgcaacacctgaatgcacggatcaaaccgtttttgctgcgc
cgcaccaaggaacaggttgccaccgaactgccgcccaagaccgagatcatccattgggtt
gacctcaatgaagcgcagcgcgatgtatacgaaaccatgcgcctggcgatggacaaaaaa
gtgcgcgacgaaatcacccgcaaaggtgtcgggcgcagtcagatcatcatcctggaagcg
ctgctaaaactgcgccaggtctgctgcgacttgcggttggtcagcgacactgcgccgaaa
aaaggcagcacctcgggcaagctcgatagcttgatgctgatgctcgaagaactgtttgcc
gaagggcggcgcattttgctgttctcgcagttcacctcgatgcttgccctgatcgaaatc
gaactgaaaaaacgcaacgtccgttacgccatccttaccgggcaaacccgcgaccggcgc
gcgccggtcaaggacttccagagtggcacgctgcaaatcttcctgatcagcctcaaggca
ggtggcgttggcttgaacctgactgaagccgacacagtgattcactacgacccgtggtgg
aacccggcggcagaaaatcaggctaccgaccgcgcctaccgcattggccaggaaaaaccg
gtatttgtgtacaagatgattgcccgcggcaccgtggaagagaaaatccagcacttgcag
caggaaaaatcggatttggcagcaggcgtactggacggtcgaatcgccggagactggaaa
ctccaggacgacgacatcgacgccctgtttgcaccgttgccgcctaaaaccgagaagcgc
tga
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