Pseudomonas sp. ML2-2023-6: V6L79_11280
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Entry
V6L79_11280 CDS
T10713
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00010
Glycolysis / Gluconeogenesis
psmz00020
Citrate cycle (TCA cycle)
psmz00260
Glycine, serine and threonine metabolism
psmz00280
Valine, leucine and isoleucine degradation
psmz00310
Lysine degradation
psmz00380
Tryptophan metabolism
psmz00620
Pyruvate metabolism
psmz00630
Glyoxylate and dicarboxylate metabolism
psmz00640
Propanoate metabolism
psmz00670
One carbon pool by folate
psmz00785
Lipoic acid metabolism
psmz01100
Metabolic pathways
psmz01110
Biosynthesis of secondary metabolites
psmz01120
Microbial metabolism in diverse environments
psmz01200
Carbon metabolism
psmz01210
2-Oxocarboxylic acid metabolism
psmz01240
Biosynthesis of cofactors
Module
psmz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psmz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psmz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
psmz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
psmz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
V6L79_11280 (lpdA)
00020 Citrate cycle (TCA cycle)
V6L79_11280 (lpdA)
00620 Pyruvate metabolism
V6L79_11280 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
V6L79_11280 (lpdA)
00640 Propanoate metabolism
V6L79_11280 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6L79_11280 (lpdA)
00280 Valine, leucine and isoleucine degradation
V6L79_11280 (lpdA)
00310 Lysine degradation
V6L79_11280 (lpdA)
00380 Tryptophan metabolism
V6L79_11280 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
V6L79_11280 (lpdA)
00670 One carbon pool by folate
V6L79_11280 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psmz04147
]
V6L79_11280 (lpdA)
Enzymes [BR:
psmz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
V6L79_11280 (lpdA)
Exosome [BR:
psmz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
V6L79_11280 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
FAD_binding_3
NAD_binding_8
AlaDh_PNT_C
DAO
3HCDH_N
Thi4
2-Hacid_dh_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
WWT68504
LinkDB
All DBs
Position
2413666..2415102
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AA seq
478 aa
AA seq
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MSQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKYHEAKDAFAIHGITTGEVKMDVAAMVGRKANIVKGLTSGVATLFKANGVTSLQG
HGKLLAGKRVELTKPDGSVEIIEAENVILASGSRPIDIPPAPVDNNVIVDSTGALEFQSV
PKRLGVIGAGVIGLELGSVWSRLGAQVTVLEALDTFLMAADAAVSKEAYKTLTKQGLDIK
LGARVTGSKVNGEEVVVTYTDANGEQTITFDKLIVAVGRRPVTTELLAADSGVTIDERGF
VFVDDHCATSVPGVFAIGDVVRGMMLAHKASEEGIMVVERIKGHKTEMNYDLIPSVIYTH
PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaaatttgacgttgtagtgattggtgcgggccctggcggctacgttgcagcc
atcaaggccgcgcaattgggcctttcgactgcttgcatcgaaaaatacaccgacaaggaa
ggcaaactggctctgggcggtacttgcctgaacgttggttgcattccatccaaggcgctg
ctggacagctcctggaagtatcacgaagccaaggatgcatttgctatccacggcatcacc
accggtgaagtgaagatggacgtagctgcgatggttggccgtaaagccaacatcgttaaa
ggtctgacttccggcgttgctaccctgttcaaggctaacggtgttacttccctgcaaggc
cacggcaaactgctggccggcaagcgtgttgaactgaccaagccagacggcagcgttgaa
atcatcgaagccgagaacgtgattctggcatcgggttcgcgcccaatcgacattccaccg
gctccagttgataacaacgtgatcgttgattcgaccggcgcactggaattccaatccgta
cctaagcgtctgggcgttatcggcgctggtgttatcggtctggaactgggttcggtatgg
tcccgtctgggcgctcaggtaactgttctggaagctctggacacgttcctgatggctgct
gacgctgccgtttcgaaagaagcctacaaaaccctgaccaaacaaggtctggacatcaag
ctgggcgctcgcgtaaccggttccaaggttaacggcgaagaagtcgttgtgacctacacc
gacgccaacggcgaacagaccatcacgttcgacaagctgatcgtagccgtgggtcgccgt
ccggtgactaccgaactgctggcagctgacagcggcgtgaccatcgacgagcgcggtttc
gtgtttgttgacgatcattgcgccaccagcgtaccgggcgtattcgccatcggtgacgtg
gttcgcggcatgatgttggctcacaaggcttcggaagaaggcatcatggttgttgagcgc
atcaaaggtcacaagaccgagatgaactacgacctgattccatcggttatttacactcac
ccggagatcgcgtgggtaggtaaaaccgaacaggccttgaaagctgaaggcgttgaagtt
aacgtcggcaccttcccgttcgcagccagtggccgtgccatggcagcaaacgacaccggt
ggctttgttaaagtcattgctgatgccaaaactgaccgcgtactgggcgtccacgtgatt
ggcccgagcgctgcagagctggttcagcagggcgctatcggtatggaattcggcactagt
gccgaggatctgggcatgatggttttctcccatccaaccctgtccgaagcgttgcacgaa
gcagcgctggctgtgaatggcggtgccatccacattgccaaccgtaagaaacgttaa
DBGET
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