Pseudomonas sp. ML2-2023-6: V6L79_11680
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Entry
V6L79_11680 CDS
T10713
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmz03032
]
V6L79_11680 (gyrA)
03400 DNA repair and recombination proteins [BR:
psmz03400
]
V6L79_11680 (gyrA)
Enzymes [BR:
psmz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
V6L79_11680 (gyrA)
DNA replication proteins [BR:
psmz03032
]
Prokaryotic type
DNA Topoisomerases
V6L79_11680 (gyrA)
DNA repair and recombination proteins [BR:
psmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V6L79_11680 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WWT68582
LinkDB
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Position
2509967..2512630
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AA seq
887 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELNNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIENPELSIDELMQFIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPDNLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAERLMEVIREELEVIRAEYGDVRRTEILDHRLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLGEGEYITTMLPVEEYTEGHFIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSEILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVQDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEGEGGAELNDEAIIDGGDGEQPLEAGADEEEPQE
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaattgtcgggcgggcactgcctgatgcacgcgatggc
ttgaagcccgtgcaccggcgtgtgctgtttgcgatgagcgaactgaacaacgactggaac
aagccgtacaagaaatctgcccgtgtggtcggtgacgtaatcggtaagtatcacccgcat
ggtgataccgctgtttacgacaccatcgttcgaatggctcagccattctctctgcgctac
ctgctggtagacggtcagggtaacttcggttcggtcgacggcgacaacgctgctgccatg
cgatacaccgaagttcgcatgaccaagctggcccacgaactgctggccgacttgcacaaa
gagaccgtggactgggtgccgaactacgacggcacggaaatgatcccggccgtcatgccg
acacgaattcccaacttgttggtcaacggctccagcggtatcgctgtgggcatggccacc
aatatcccgccgcacaacctgggtgaagtcatcgatggttgcctggcgctgatcgaaaac
ccggagctgagcatcgatgaactgatgcagttcatcccgggtccggacttccctactgct
gcgatcatcaacggtcgcgcaggcatcatcgaagcctatcgtaccggtcgtggccgtatt
tacatgcgcgcccgctccatgatcgaagacatcgacaaggtcggtggtcgtcagcagatc
gtcatcaccgagcttccttaccagttgaacaaggcgcgtctgatcgaaaagatcgccgag
ctggttaaagagaagaagctcgaaggcatcactgaactgcgcgacgagtctgataaagac
ggtatgcgcgtggtgatcgaactgcgccgtggtgaagtgccggaggttattcttaataac
ctgtacgcccagacccagctgcaaagcgttttcggtatcaacatcgttgcgttgatcgac
ggtcgtccacgtatcctgaacctcaaggatctgctggaagccttcgttcgtcaccgccgt
gaagtggttacccgtcgcaccgttttcgaactgcgtaaagcccgtgaacgtggtcacatc
cttgaaggccaggcagttgccctgtccaacatcgacccggttatcgcgttgatcaaggcc
tcgccaacgccgtcggaagccaaggaagcgctgatcagcaccccttgggagtccagtgca
gtagtggcgatggttgaacgtgccggtgccgattcgtgccgcccggacaaccttgatccg
cagtacggtctgcgcgagggcaagtacttcctgtcgccagaacaggcgcaagccattctt
gaattgcgcttgcaccgtttgaccggtcttgagcacgagaagctgctggccgagtaccag
gaaatcctcaaccagattggtgagctgatccgcatcctcaacagcgctgagcgcttgatg
gaagtgatccgcgaggaactggaagtcattcgtgccgaatacggtgatgtgcgtcgtact
gaaatcctggatcaccgccttgatctgacgctgggcgacatgatcccggaagaagaacgc
gttgtgaccatctcccacggtggctatgccaagacccagcctttggctgcgtaccaggcc
cagcgtcgtggtggtaaaggtaaatcggctactggcgtcaaggatgaggactacattgct
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctcaagacttatgaaatccctgaagcgtcccgcgctgcccgtggtcgcccactg
gtgaacctgttgccgctgggtgagggtgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcacttcatcttcatggcaactgccaacggcaccgtgaagaagaccccg
ctggaatccttcagtcgtcagcgcagcgtaggtttgatcgcgctggagctggacgaaggc
gacgtattgatcagcgccgcgatcaccgatggcgaacgcgaagtgatgttgttctccgat
ggcggcaaagtaacccgctttaaagagtccgatgtgcgtgccatgggtcgtactgctcgc
ggcgttcgcggcatgcgtctgccagaaggtcagaagctgatttcgatgctgatccctgaa
gaaggcagcgagatccttaccgcttcggcgcgtggatatggcaagcgtacggcaatcagt
gagttccctgagtacaagcgtggcggtcagggcgttatcgccatggtcagcaacgagcgt
aacggtcgtctggtcggagcagtccaggtgcaggacggcgaagagatcatgttgatttcg
gatcagggcactctggtgcgtacccgtgtcgacgaagtctcgagcttgggccgtaacacc
cagggcgttaccttgatcaagcttgccagcgatgaaacgctggtcggacttgagcgggtt
caggagccttcggaagttgaaggcgaggaactcgaaggtgagggcgaaggcggtgcagag
ctcaacgacgaggccatcatcgatggtggcgacggcgagcaaccgctagaggctggcgct
gacgaagaagaaccgcaggaataa
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