Pseudomonas sp. ML2-2023-6: V6L79_12430
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Entry
V6L79_12430 CDS
T10713
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00010
Glycolysis / Gluconeogenesis
psmz00020
Citrate cycle (TCA cycle)
psmz00260
Glycine, serine and threonine metabolism
psmz00280
Valine, leucine and isoleucine degradation
psmz00310
Lysine degradation
psmz00380
Tryptophan metabolism
psmz00620
Pyruvate metabolism
psmz00630
Glyoxylate and dicarboxylate metabolism
psmz00640
Propanoate metabolism
psmz00670
One carbon pool by folate
psmz00785
Lipoic acid metabolism
psmz01100
Metabolic pathways
psmz01110
Biosynthesis of secondary metabolites
psmz01120
Microbial metabolism in diverse environments
psmz01200
Carbon metabolism
psmz01210
2-Oxocarboxylic acid metabolism
psmz01240
Biosynthesis of cofactors
Module
psmz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psmz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psmz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
psmz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
psmz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
V6L79_12430 (lpdA)
00020 Citrate cycle (TCA cycle)
V6L79_12430 (lpdA)
00620 Pyruvate metabolism
V6L79_12430 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
V6L79_12430 (lpdA)
00640 Propanoate metabolism
V6L79_12430 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6L79_12430 (lpdA)
00280 Valine, leucine and isoleucine degradation
V6L79_12430 (lpdA)
00310 Lysine degradation
V6L79_12430 (lpdA)
00380 Tryptophan metabolism
V6L79_12430 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
V6L79_12430 (lpdA)
00670 One carbon pool by folate
V6L79_12430 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psmz04147
]
V6L79_12430 (lpdA)
Enzymes [BR:
psmz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
V6L79_12430 (lpdA)
Exosome [BR:
psmz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
V6L79_12430 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_oxidored
HI0933_like
DAO
FAD_binding_2
NAD_binding_8
FAD_binding_3
2-Hacid_dh_C
3HCDH_N
Thi4
AlaDh_PNT_C
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
WWT64163
LinkDB
All DBs
Position
2695024..2696415
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AA seq
463 aa
AA seq
DB search
MSEIKFDVIVVGGGPGGYVAAIRASQLGLRTALVEKAQLGGVCLNWGCIPTKALLRSADV
LRLIGNASSFGIEVAAARPDLKAIVKRSRDVAAQLHRGVSGLMKKHRVQVFNGHARLDGP
QRLKVTGEKGDFSLSAPHIILATGARARVLPGMEPDGKHFWTYRQALVPDSVPKRLVIIG
AGAIGVEFASFYHALGAQVSLVEMAERILPIEDQEISAHVAQALTRDGIRLYTGCALQSS
KVEQGIVQLRLEGKSNETLEADVVLVAAGIVGNVEELGLESTGVKVQHTHVLVDEFCRTG
EPGVYAIGDLAGAPWLAHKASHEAVLCVEKIAGLNPHPLDSRSVPACTYSHPQVASVGYT
EAQARSAGKTIRVGKFPFAANGKAIAMGATEGFVKVVFDAASGELLGAHMVGEEVTEMIQ
GYAIARGLETTEAELIDSILPHPTMSEAMHEAVLAAYDRALHG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaataaaatttgatgtgatcgtcgtgggtggcggtcccggcggttatgtggcg
gccatccgcgccagtcagctggggctgcgcacggcgttggtggaaaaggcgcagttgggt
ggggtctgcctcaactggggctgtattccgaccaaggccctattgcgcagtgccgacgta
ctgcgcctgatcggcaatgcgagcagctttggtatcgaggtcgcagcggccaggcctgac
ctgaaggcaatcgtcaagcgttcccgcgatgtggccgcccagttgcatcggggtgtcagc
gggttgatgaaaaagcaccgcgtccaggtgttcaacggacatgcgcgactggatgggccg
cagcggctgaaagtgaccggggagaagggtgactttagcctgtcggcgccgcacattatt
ctggcaaccggtgcccgggcacgggtactgccgggcatggagccggacggtaaacatttc
tggacctaccgccaggcgctggtgccggacagcgtgcccaagcggctggtgatcatcggc
gcgggtgcgatcggtgtcgagttcgccagtttctatcacgctcttggcgctcaggtcagc
ctggtggaaatggctgagcggattctcccgatagaggatcaagagatcagtgcccatgtg
gcgcaggccctgactcgtgacggtatccggctgtacaccggctgtgcgctgcaaagcagc
aaggtggagcagggcatagtgcagttgcgtctggaaggaaagagcaatgaaacgctggag
gccgacgtagtgctggtggctgcggggattgtcggtaacgttgaggaactggggttggaa
agcactggggtcaaggtgcagcacacccatgtattggtggatgagttttgccgcacgggc
gagccgggcgtatacgccattggtgatcttgccggggcgccgtggctggcgcacaaggcc
agtcacgaagccgtgctttgtgttgaaaaaatcgcgggtttgaatccccatccattggat
tcccggagcgtgccggcctgtacctatagccacccgcaagtcgccagcgtcggctacacc
gaagcccaggcgcgcagtgccggcaagacgatcagggtcggcaagttcccctttgcggct
aacggcaaggcgattgccatgggcgctacggagggtttcgtcaaggtcgtgttcgacgcg
gccagcggcgagttgctgggcgcccatatggtcggcgaggaggttaccgaaatgattcag
ggctacgccatcgcacgggggctggagaccacagaggctgaactgatcgacagtatcctg
ccacacccgaccatgtccgaagccatgcatgaagcggtactggcagcctacgatcgtgcc
ctgcatggctga
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