Pseudomonas sp. ML2-2023-6: V6L79_16545
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Entry
V6L79_16545 CDS
T10713
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6L79_16545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psmz03021
]
V6L79_16545
Transcription machinery [BR:
psmz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6L79_16545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
DnaG_DnaB_bind
Motif
Other DBs
NCBI-ProteinID:
WWT64908
LinkDB
All DBs
Position
complement(3606327..3606833)
Genome browser
AA seq
168 aa
AA seq
DB search
MSHDRIVSPVEQLYANHHGWLRGWLHRRLGHSADAEDLAHDTFIRVLRSKHDAQELRQPM
AFLATIANGLLINRWRRQAIERAYLEALAARPMAEEPSPEERYLTIETLLQLDSLLIGLS
ARVRQIFFLSQLDGLTYPQIATQLSLSVAQVQRAMGKAFSVCYASRFE
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgacaggatcgtctcgcccgtcgagcagctgtacgcgaatcatcatggttgg
ctgcggggctggttgcacaggcgattggggcacagtgccgatgccgaggacctggctcat
gacacgtttatccgcgtgctgcgctcaaagcacgatgcgcaggaactgcgtcaacccatg
gcgtttctggcgacgattgccaacggcctgctgatcaaccgctggcgtcgccaggcaatc
gagcgggcttatcttgaggcgctggcagcgcggccgatggccgaggagccttctcccgaa
gaacgctacctgacgatcgaaactctgttgcaactcgattcgctactgatcgggttatct
gcccgggtgcggcagattttcttcttgtcccagctcgatggcttgacctatccgcagatt
gccacgcagttgagcctgagcgtggcccaggtgcagcgggccatgggcaaggcgttcagt
gtttgttatgcgagccgttttgaatga
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