Pseudomonas sp. ML2-2023-6: V6L79_20720
Help
Entry
V6L79_20720 CDS
T10713
Symbol
ydcS
Name
(GenBank) putative ABC transporter substrate-binding protein YdcS
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L79_20720 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psmz02000
]
V6L79_20720 (ydcS)
Transporters [BR:
psmz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
V6L79_20720 (ydcS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Glyco_hydro_62
PUD1_2
Motif
Other DBs
NCBI-ProteinID:
WWT65666
LinkDB
All DBs
Position
4451238..4452389
Genome browser
AA seq
383 aa
AA seq
DB search
MFVHKTAMLSAITTALLASATLQAGEPLKAVGAGEGQLDIVAWPGYIERGESDKAYDWVT
GFEKETGCKVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIVGKRVQPINTALIPNW
KNIDPRLANAQWYVVNQQTYGTPYQWGPNVLMYNTGVFKTAPDSWSVVFNAQNLPDGKPN
KGRVQAYDGPIYIADAALYLKTAKPELGIQSPYELTETQYQAVLELLRAQQPLIHRYWHD
TTVQMSDFKNEGVVASSAWPYQVNGLMNEKQPIASTIPKEGATGWADTTMLHAEAKHPNC
AYKWMDWSLQPKVQGDVAAWFGSLPAVPAACNSSELLGAQGCKTNGFDQFEKIAFWKTPQ
AEGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcacaagaccgcaatgctcagtgcaatcaccaccgcgctgctggccagcgcc
acgctccaggccggcgaaccgctcaaagccgtcggtgcaggcgaaggccagctggatatc
gttgcatggcccggctacatcgagcggggcgagagcgacaaggcttatgactgggtaacc
ggtttcgaaaaagaaaccggctgcaaggtcaacgtcaagaccgccgccacctccgatgaa
atggtcagcctgatggccaagggtggctatgacctggtcaccgcctccggcgacgcatcg
ttacggttgatcgtcggcaagcgcgtacagccgatcaatacggcgctaatcccgaactgg
aaaaacatcgacccgcgactcgccaatgcgcagtggtacgtggtcaaccagcaaacctac
ggcaccccgtatcagtggggcccgaacgtactgatgtacaacaccggtgtgttcaaaacc
gcgcctgacagctggagcgtggtgttcaatgcgcagaacctgcccgacggcaaaccgaac
aagggtcgcgtgcaagcctacgacggcccgatctacattgccgacgcggcgctgtacctg
aagaccgccaagccggaactgggcatccagagcccctatgaactgactgaaacccaatac
caggccgtgcttgaactgctgcgtgcccagcaaccattgattcaccgctactggcacgac
actaccgtgcaaatgagcgacttcaaaaacgaaggcgtggtcgcgtccagcgcctggccg
tatcaagtcaacggcctgatgaacgagaaacagccaatcgcctcgaccatccccaaggaa
ggcgccacgggctgggccgacaccaccatgttgcacgccgaggccaagcaccccaactgt
gcttacaagtggatggactggtcgctgcaacccaaggtccagggcgacgtagccgcctgg
tttggttcgttaccagcagtgccggcagcgtgcaactcgagcgaactgttgggcgcacaa
ggctgcaagaccaacggttttgaccagttcgagaagatcgccttctggaaaaccccgcag
gctgaaggcggtaaatttgtgccgtacagccgctggacccaggactacatcgcgatcatg
ggcggtcgctaa
DBGET
integrated database retrieval system
