Pseudomonas sp. ML2-2023-6: V6L79_21710
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Entry
V6L79_21710 CDS
T10713
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00061
Fatty acid biosynthesis
psmz00071
Fatty acid degradation
psmz01100
Metabolic pathways
psmz01212
Fatty acid metabolism
psmz02024
Quorum sensing
psmz04146
Peroxisome
Module
psmz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
V6L79_21710 (fadD1)
00071 Fatty acid degradation
V6L79_21710 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
V6L79_21710 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L79_21710 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psmz01004
]
V6L79_21710 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psmz04147
]
V6L79_21710 (fadD1)
Enzymes [BR:
psmz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
V6L79_21710 (fadD1)
Lipid biosynthesis proteins [BR:
psmz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
V6L79_21710 (fadD1)
Exosome [BR:
psmz04147
]
Exosomal proteins
Exosomal proteins of breast milk
V6L79_21710 (fadD1)
Exosomal proteins of breast cancer cells
V6L79_21710 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WWT65852
LinkDB
All DBs
Position
complement(4673096..4674787)
Genome browser
AA seq
563 aa
AA seq
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MIESFWKDKYPTGIAAEINPDEYPNIQTVLRESCQRFADKPAFSNLGKTITYGELYEQSG
AFAAWLQQHTDLQPGDRIAVQLPNLLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFKD
SGAKALVCLANMAHLAEKVVPQTSIKYVIVTEVADMLSPFKRVLINSVIKYVKKMVPAYH
LPQAIKFNDVLSKGQGQPVKEANPASSDVAVLQYTGGTTGVAKGAMLSHRNLIANMLQCK
ALMASNLNEGCEILITPLPLYHIYAFTFHCMAMMLLGNHNVLISNPRDLPAMVKELSKWK
FTGFVGLNTLFVALCNNDAFRKLDFSALKVTLSGGMALQMSVAERWKTVTGCPICEGYGM
TETSPVATVNPAQSIQVGTIGIPVPSTLCKVINDAGEELPLGEVGELCIKGPQVMKGYWE
RPDATAEIMDAEGWLKSGDIALIQPDGYIRIVDRKKDMILVSGFNVYPNELEDVMASLPG
VLQSAAIGIPDEKTGELIKVFIVVKPGMTLTKDQVMAHMRANLTAYKAPKFVEFRDSLPT
TNVGKILRRELRDEELRKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattgagagcttttggaaggataagtacccaactgggattgctgctgaaatcaatcca
gatgaatacccaaatattcagacggtactgcgggaatcttgccagcgtttcgccgataaa
ccggcgttcagtaatctgggcaaaaccatcacctatggtgagctttatgagcagtccggc
gcttttgctgcctggttgcagcagcacaccgacctgcaacccggcgatcgcatcgccgtg
caattgcccaacctgctgcaatacccgatcgctgtgttcggagcaatccgcgccggcttg
atcgtggtcaacaccaacccgctgtataccgcgcgggaaatggaacaccaattcaaggac
tctggcgccaaggcgctggtatgcctggcgaacatggcgcatctggccgaaaaggtcgtg
ccgcagacttcgatcaagtatgtgatcgtcaccgaagtggccgacatgttgtcgcccttc
aagcgggtgctgatcaactcggtcatcaagtatgtgaagaaaatggttccggcttatcac
ttgccccaggccatcaaattcaacgatgtgctgagcaaagggcagggccagccggtcaag
gaagccaaccctgcgagcagtgatgttgctgtgctgcaatacaccggtggcactacgggt
gtggccaagggcgcgatgctgagccaccgcaacctgatcgccaacatgttgcagtgcaag
gcgctgatggcttccaacctcaatgagggttgtgaaatcctgattacgccactgccgctg
taccacatctacgcctttacctttcactgcatggcgatgatgttgctcggtaaccataac
gtgctgatcagcaacccacgtgatttgccggcgatggtcaaagaactgtccaagtggaag
ttcaccggctttgtgggtctcaataccctgtttgtggcgctgtgcaacaacgatgccttc
cgcaagctggacttttcggctctcaaggtgacgttatcgggcggcatggccttgcaaatg
tcggtggccgaacgttggaaaactgtgaccggttgcccgatctgcgagggttacggcatg
accgaaaccagccctgtggccacggtaaacccggcccagagcatccaggttggcaccatt
ggcattccggtgccttcgacgctgtgcaaagtaatcaacgatgccggtgaggagctgccg
ctgggtgaagttggcgagttgtgcatcaagggcccgcaggtcatgaaaggctattgggag
cgcccggacgcgactgcggagatcatggacgctgaaggttggttgaagtccggtgatatc
gcactcattcagccagatggctatatccgtattgtcgatcgcaagaaagacatgattctg
gtttcgggcttcaatgtgtacccgaacgagctggaagacgtgatggcttccttgcctggt
gttttgcagtccgcggcaatcggtattccggatgagaaaaccggtgaactgatcaaagtg
tttatcgtggtcaagccgggcatgaccttgaccaaagaccaggtgatggcgcatatgcgt
gccaatctgacagcctacaaagcgcctaaattcgtcgaattccgcgacagtttgccgacc
accaacgtgggcaaaattttacgtcgtgagctgcgagacgaagagctgagaaagctgggc
cttaaaaagtaa
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