Pseudomonas sp. ML2-2023-6: V6L79_22065
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Entry
V6L79_22065 CDS
T10713
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6L79_22065 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmz03400
]
V6L79_22065 (ung)
Enzymes [BR:
psmz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V6L79_22065 (ung)
DNA repair and recombination proteins [BR:
psmz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6L79_22065 (ung)
Prokaryotic type
V6L79_22065 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WWT65919
LinkDB
All DBs
Position
complement(4753087..4753779)
Genome browser
AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPVWKQALREEFDKPYMAELREFLRQEHAAGKEIYPPGPLIFNALNLTPLD
RIKVVILGQDPYHGPGQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIAPHGCLQHWA
EQGVLLLNTTMTVERANAASHAKKGWEHFTDRIIQVVSEQQPKLVFLLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFIGNGHFSRTNKFLEQNGLSPIDWKLPPA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggatgaccgtataaaacttgaacctgtatggaagcaggccttgcgtgaagag
ttcgataaaccttacatggccgaactgcgtgaattcttgcgtcaggagcatgcggccggt
aaggaaatttacccaccgggcccgcttattttcaacgctttgaacctgacgccgttggac
aggatcaaggtggttatccttggccaggacccttatcacggcccaggccaggcacatggg
ttgtgtttttcagtgcagcccggtgtcccgaccccgccctcgctggtcaatatttataaa
gagctcaagcgcgatttgaatatcgacatcgccccccacggctgcttgcagcattgggct
gagcagggtgttctgctgctcaatacaacgatgacggtggagcgtgccaatgccgcgtcc
catgcaaaaaagggctgggagcactttactgaccgaattattcaggtagtgagtgagcag
cagcctaaacttgttttcttgctgtggggcgcccatgcgcagagcaagcaaaaactgatt
gatgcgaccaagcatctggtgctgacgtcggtgcacccatcgccgctatcggcctatcga
gggtttatcggtaacggccacttcagtcgaaccaacaagttccttgagcaaaatggcttg
tccccgatcgactggaaactgccaccggcataa
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