Pseudomonas sp. ML2-2023-6: V6L79_22275
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Entry
V6L79_22275 CDS
T10713
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psmz03016
]
V6L79_22275 (truD)
Enzymes [BR:
psmz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
V6L79_22275 (truD)
Transfer RNA biogenesis [BR:
psmz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6L79_22275 (truD)
Prokaryotic type
V6L79_22275 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WWT65954
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All DBs
Position
complement(4795446..4796504)
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AA seq
352 aa
AA seq
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MNESDLLGPRAYGEALGTAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSGAENDTLKILKSSRHKR
KLQRGAHAANGFTLRLTQMAGDKDALEQRLQLIAKQGVPNYFGTQRFGWQGGNLGEARDY
AARKALPEQRNVRSRLLSTARSYLFNQVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGESPTTGVTHTLEQSIAEREADLRDWLVRAGMSHERRI
LRLPIGRLTWHYPQPDILQLEFVLPAGCFATVLVRELVDLVPLDQADSLCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtctgatttgctcggtccacgggcctatggcgaggcattgggcacggcagtg
ctcaaagcgacggctgaagattttcaagtcgacgaagtgcttgatataccgctgtccgga
gacggtgaacacctgtggttgtgggtcgagaaacgcggcctgaacaccgaagaggccgcg
cgccgaatcgccaaggcggcaggcgtgcctttgcgcactgtcagctacgcaggcctcaag
gaccgtcaggcgttaacccgccaatggttcagcgtgcaactgccgggcaaggcagaccct
gatttgtcgggcgctgaaaacgacaccctgaaaattctcaagagctcgcgccacaaacgc
aaattgcagcgtggagcccatgcggccaacggctttactctgcgtctgacgcaaatggcc
ggggacaaggatgcactggaacagcgcctgcaactgatagccaagcagggcgtaccgaac
tacttcggcacccagcgtttcggctggcagggcggcaatctgggcgaagcccgcgattat
gcggcgcgcaaagccttgcctgagcagcgtaacgtgcgttcgcggttactctccaccgct
cgcagctatctgttcaatcaggtgctggcggcacgcgtggccgatggtagctggcagcgg
gctcaggtcggtgatttgctggcctttaccgacagccgcagttttttcccggcgggcgaa
gctgaatgcagcgatccgcgactggctatcctcgatctgcaccctaccggcccgcagtgg
ggcgagggtgagtcgccgaccaccggcgtgacccatacgcttgagcaatcgatcgcagag
cgcgaagccgatttgcgcgactggctggttcgcgcgggcatgagccatgagcgacgcatc
ctgcgactgcccattggccggttgacgtggcattatccgcagcctgacattctgcaactg
gaatttgttctgccggccggatgcttcgccactgttctggtgcgcgagcttgttgatctg
gtgcctttggatcaagcggatagcctatgcgtattctga
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