Pseudomonas sp. ML2-2023-6: V6L79_23570
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Entry
V6L79_23570 CDS
T10713
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmz03400
]
V6L79_23570 (phrB)
Enzymes [BR:
psmz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
V6L79_23570 (phrB)
DNA repair and recombination proteins [BR:
psmz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
V6L79_23570 (phrB)
Prokaryotic type
V6L79_23570 (phrB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WWT66197
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All DBs
Position
5069355..5070800
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AA seq
481 aa
AA seq
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MQLIWLRSDLRHYDNTALSAAATRGPTVAVYLISPDQWRAHDDAPCKVDFWLRNLRPLSD
SLQQLNIPLLIRTAATWDQAPAVLLELCQQLGIEAVHANQEYGINETRRDKAVAQALDAK
GIEFHSYLDQLLFQPGSILTQSGSYFQVFSQFRKVCYNRLHMAMPQIVASPKAQAPLHIT
RDSLPETVDGFAVPGAALRALWPAGEEEARQRLAQFADEQIEYYKDQRDLPARPGTSQLS
AYLAAGVISPRQCLHAALQSNNGEFESGSPGVSTWITELLWREFYKHILVGYPRVSRHRA
FRPETEFLPWRDAPTELAAWKQGCTGFPIIDAAIRQLLQTGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMQHLIDGDLAANNGGWQWSSSTGTDSVPYFRIFNPLTQSERFDPEGRFIK
HWLPELADLNKKQLHNPALIGGLFGVANYPVPIVNLSQSRDRALSAFKNLPSRQMLEVSH
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgatttgcgccactacgacaacaccgccctgagcgcc
gccgccacacgcggcccaaccgtggccgtttacctcatcagccctgatcaatggcgggcc
catgacgacgcgccgtgcaaggtcgacttctggctgcgcaacctgcgccccctgagcgac
agcctgcagcagctcaatatcccgctgctgattcgtaccgctgcaacctgggatcaggcg
ccggcggtcctccttgagttgtgccagcaactgggtatcgaggcggtccacgccaaccag
gaatacgggatcaacgaaacccgtcgcgataaagcagtggctcaagcccttgacgccaag
ggcattgaatttcacagctacctcgaccaactgctgttccagccaggcagcatcctgacg
cagtccggctcgtactttcaggtgtttagtcaatttcgcaaggtctgctacaaccgcctg
cacatggccatgccgcaaattgtcgccagccccaaggcccaagcgccgttgcacatcaca
cgcgactccctgcctgaaacagttgacggttttgctgtgcccggtgcggcgttacgggcg
ctatggcctgcgggggaagaggaagctcggcaacgtctggcgcagtttgccgacgaacag
attgaatactacaaggaccagcgcgacctgccagccagacccggcaccagtcagctttcg
gcctatctggcagcgggcgttatctccccccggcagtgcctgcatgccgccctgcaaagc
aacaacggtgagtttgaaagcggcagccccggcgtatctacctggatcacggagctgcta
tggcgcgagttctacaagcacattctggtgggttacccacgggtctcgcggcaccgcgcc
tttcgccccgaaacagagtttctgccgtggcgtgacgcgcccactgaactggccgcctgg
aaacagggctgtacgggcttcccgatcattgacgcggccatcagacaactgctgcaaacc
ggctggatgcacaaccgcctgcgtatggtagtagcgatgttcctgaccaagaacctgttg
atcgactggcgtgaaggcgaacgtttttttatgcagcacttgatcgacggcgacctggcc
gccaacaacggcggctggcagtggagctcttccaccggcaccgactccgtgccgtatttt
cgaatcttcaacccgctgactcagtcagagcgcttcgaccccgaaggtcgatttatcaag
cactggctgcccgaactggcggacctgaataaaaaacagctgcacaaccccgccttgatt
ggcggactgtttggcgtggccaattacccggtccccatcgttaacttgagccaaagccgc
gaccgcgccctgagcgctttcaaaaatctgccatcacgccaaatgctggaggtgagccat
ggctga
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