Pseudomonas sp. ML2-2023-6: V6L79_24040
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Entry
V6L79_24040 CDS
T10713
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psmz03016
]
V6L79_24040 (truB)
Enzymes [BR:
psmz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V6L79_24040 (truB)
Transfer RNA biogenesis [BR:
psmz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6L79_24040 (truB)
Prokaryotic type
V6L79_24040 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WWT66277
LinkDB
All DBs
Position
complement(5176655..5177572)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGEVLQTRPVTVGRADIEAVLPNFRGKIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTITRLELLASEGDTARLAVDCTKGTYI
RTLVEDIGEQLGCGAYVAELRRTHAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctgttggacaagcct
cttggattcacttccaacgcggccctgcagaaagttcgctggctgctcaatgccgagaag
gcagggcacaccggtagtctcgatccattggccagcggtgtattgccgctgtgctttggc
gaagccaccaaattttcgcaatacttgctcgattccgacaagggttatgaaaccctgatg
caattgggcaagaccaccaccacggcagatgctgagggtgaggttttacagactcgccca
gtgaccgttggtcgtgccgatatcgaagctgttttacccaattttcgtgggaaaatcagt
cagataccgccgatgtactctgcactcaagcgagacggacagccgctttacaagctggcc
cgtgcaggcgaagtggtggagcgtgaaccacgttctgttactattacacgcctcgaatta
ctggccagcgaaggcgacactgcgcgcttggccgtcgactgcaccaaaggcacctatatc
cgtaccctcgtggaagatatcggtgagcaattggggtgcggtgcatacgttgcagagttg
cgtcgtacgcacgccggacctttcagcttggcccaaacggtcacgctggaagagttggaa
gcggtgcatgccgaaggcggtaatgaagcggtagatcgcttcctgatgccatcggacagc
gggttgctggactggccgttgctgcacttctcggaagccagtgctttctattggctcaat
ggtcagccggttcgtgctccggatgctccgaagttcggtatggtgcgggtacaagatcat
aacggtcgcttcatcgggatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcga
ctgattcggtcggaatga
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