Pseudopedobacter saltans: Pedsa_0178
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Entry
Pedsa_0178 CDS
T01430
Name
(GenBank) Collagen triple helix repeat-containing protein
Organism
psn
Pseudopedobacter saltans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
ADY50764
UniProt:
F0SDN7
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Position
220210..222738
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AA seq
842 aa
AA seq
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MDKALPKGTFLKKIPILFFLLFGSVQLWAQSGSVGIGTRSPNENAILDVSSKEKGVLVPR
LSDGEKNVLSTKLALQDKGLLIFNTSTTQFNYWDGIAWIAITNGDGIRGTIWFTGPNNPS
SSYPVSPNHQDMYLNTASGDVFKYDNSGWNPIANLKNGAVGPKGDKGDPGTKGDKGDQGI
QGLSGEKGEQGVQGIQGIPGIPGPKGDKGEVGDQGPRGEIGPVGLQGEKGAQGEKGDQGA
KGDKGEKGDKGDQGPLWFTGTDDPQRLSLSGIREGDLFLDTNTGKVYRFEGGRWSAPVAN
LTTGVLGPRGEKGDQGALWFTGDKDPSGLLLSGLREDDLYLDTSTGKVYRYKADGWSLPI
ANLTTGVVGPMGPQGPVGNKGEKGDTGPQGAQGVQGARGDKGEQGPTGPQGPRGDKGDRG
DQGIQGIQGAQGLQGVKGDQGPQGLKGPQGDKGEKGDQGPIGLTGPKGDRGDQGLQGPKG
DKGDKGDKGDQGTQGIVGQTGPIGPQGIQGPAGPQGAIGPKGDKGDIGPIGPTGLTGPAG
SKGDQGLKGEKGDKGDKGDPGVQGAVGLTGPIGPQGIQGPVGAVGPEGPRGFKGDKGDKG
DKGDKGDTGEIGPVGPIGPQGPQGIKGDGGNVWHEGSSVPDELLGSIGDLYLDKLSGDVY
KKTGQFVWEKTANIKGPVDTSTSWQINGNTGTNPEISGASGSFLGTKDAKDLVFATNNIE
VIRIKSSGNVGISQSSPLAKFHVNGDLYLGSAGSILKGIAKGTFTFLGESIAPGSAVKKN
ISLGRVSLESVITVSPNQELPDGVTVSYVRGISTNQIEVKLYNSSTNIVVLPDVVFNAVI
IN
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggataaagctttacctaaaggaactttcttgaaaaaaatcccaattctattttttttg
ctatttggaagtgtgcaattatgggcgcaatctggatcggtaggaattggaacaaggtct
ccaaatgagaatgccatattagatgtttcctccaaggaaaagggggttcttgttccaagg
ttatctgatggagagaagaatgtactttcaacgaaattggcattacaggataaaggacta
ttgatttttaatacttctacaacccaatttaattattgggatggtattgcctggatcgca
atcacaaatggcgacggaattagaggaactatttggtttactgggccaaataatccaagt
tcttcctatccagttagcccaaatcatcaggatatgtatttgaatactgcttcgggagat
gtgtttaaatatgacaatagtggctggaaccctattgccaatttaaaaaacggagcagta
ggaccaaaaggtgataaaggggatccgggaacaaaaggagacaaaggtgatcagggaatt
cagggattatccggagaaaagggcgagcaaggcgttcaagggatacaaggtattccggga
attcctggtccaaaaggtgataaaggggaggtgggagatcagggacctcggggagagata
ggtccagttggactgcaaggagaaaagggggcacagggagaaaagggtgaccagggggct
aaaggggataagggggaaaaaggagacaaaggtgaccaggggccgttatggtttaccggt
acagatgatccacaaaggttatcactttcgggaataagagagggagatctgtttcttgat
acaaatacaggcaaggtatatcggtttgaaggggggcgttggtctgcgccagttgcgaac
ctgacaacaggtgttttgggacctcgtggagaaaaaggagatcagggtgctttgtggttt
acaggagataaagatccatctggattattattatctggtttaagagaggatgatttgtat
ttggatacaagtacaggaaaagtatatagatataaggcggatggctggtctctgcctatt
gcaaatttaaccacaggagttgttggaccgatggggcctcaagggccagtgggtaataaa
ggtgaaaaaggcgatacaggccctcaaggagcacagggagtacaaggcgcaagaggagat
aaaggagagcaagggccgacgggtcctcaagggccaaggggagataagggcgaccgtgga
gatcaggggattcaaggtattcagggagcgcagggtttacaaggagttaagggcgaccag
ggaccgcagggactgaaagggccacaaggagacaagggagaaaaaggagatcaagggcca
ataggtcttacaggtccaaaaggagatcgaggtgatcagggtttgcaggggccaaaaggg
gataagggagacaaaggagacaaaggagatcagggtacacagggaatcgttggacagact
ggtcccattggacctcaagggattcaaggaccagcgggtccacagggagcgattggacca
aagggggataaaggtgatataggtcccattggacctacaggcttgactggtccggcagga
tctaaaggtgatcagggattaaaaggtgagaaaggggataagggtgataaaggcgatccg
ggagttcaaggagccgttgggttaactgggcctattggcccacaaggaattcaggggccg
gtaggagctgtcgggccagagggcccgcggggttttaaaggagacaagggggataaaggc
gacaagggggataaaggcgacactggagaaatagggccggttgggccaattggacctcaa
gggccacaaggtattaaaggggatggaggcaatgtttggcatgagggatcctcggtgcca
gatgagttattaggcagtattggtgatttatatttagataaattaagcggtgatgtttat
aaaaaaacaggtcaatttgtgtgggaaaagactgctaatattaaaggacctgttgatact
tcaacatcctggcagataaacggtaacacggggacaaatccggagatatcgggggcatca
ggatcatttttgggtactaaagatgcaaaggacttagtttttgcgacaaataatatagag
gtaatccgtattaagtcctcaggaaatgttgggataagccaaagttcacctctggcgaaa
tttcatgtaaatggagatctttatttggggtctgccggaagcatattgaagggaattgct
aaaggtacatttacatttttaggagaatcaattgcacctggatctgcagttaagaaaaat
atttctttaggtagggtaagtctagagtctgtaataacagtatctcctaatcaagaactc
cctgacggtgtaacagtttcttatgtcaggggcatttcaactaatcaaatagaggtgaaa
ttatataattcgagtaccaatatagtggttttgcctgatgttgttttcaatgctgtaatt
attaactag
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