Pseudopedobacter saltans: Pedsa_0546
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Entry
Pedsa_0546 CDS
T01430
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
psn
Pseudopedobacter saltans
Pathway
psn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Pedsa_0546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
psn03011
]
Pedsa_0546
Ribosome [BR:
psn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Pedsa_0546
Bacteria
Pedsa_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
ProQ_C
Motif
Other DBs
NCBI-ProteinID:
ADY51126
UniProt:
F0S7A1
LinkDB
All DBs
Position
complement(677085..680111)
Genome browser
AA seq
1008 aa
AA seq
DB search
MLDSIINKYNPKDPSTHGILKYFSEQLSEKENISFILEIFKSGSWLLATEISRTNSSEEL
NEKTTIQFYGLFDQWVANRIDFSNTIFSSRTRNPYITTNLHFQFREALLSIKNLDFPEKG
MKILEKLILNVNPIYLERFLDGTLWIVIEEYEEKEIEVFLSYFIKAYIANSSINIINFLY
HSLNVLAFTHKIYYLSDIFIKSLNQVSKLIIENRTSSNYKQLILVLLIDLIQNKKLDLSS
SKYEYVIKETLDSLDQGSISNLNFLLFLKRFNYSFDEYDAVLESEALLENISEKISSIPK
RTDIEIQALLHHLIKTSNEYFELFLFHQELMNQQYAEEHILRFINLIDEIRIAFLPILWY
EEFLNFSPINGEISFATEAGFEVKVDEEFFKRKILEKKIESKITDDFILHFGYGFLNTKY
LTGYPKANLFLKRSKQTRKPLDLKDKDQIEEIERFYISNLNYSASNKKNVLILTPFKDTI
HKIITKYELKAFFHSLELFLIEKANNYLSILSPFPKKSHSFKIIVPPKYISEYNLNLSEG
KFWEILKRLRPYLYKIIYLNHKEKVESIKKINYAFKNDRYISGVIKSTSKGGLIVDIFGV
EAFLPGSQIDVKPVIDYDSYIGKTLDFKIVKISEANQNTVVSRRLIIESVIEMQREEISK
KLEKGQILEGTIKNITYFGAFIDLGGIDGLLYITDISWGRINHPSDLLELNQKIHVVVLD
YEDNKKRISLGLKQLHPNPWDALDAKIKIGTRVTGKVVSVEDYGIFLEIEPGVEGLVHIS
DISWSSTTVNCKELFKLGDFLEAIVITVGIEERKMSLGLKQLISDSWINKIKKYTKGTKH
IAKVLNLVDYGIFVELEEDVIGLVHISKILSYRRINHPAEFTKIGEKINISILEIDKKNR
RLSLGYEIKEENGYLFEKVFLVNSIHKGEIIDIKKNGAIIALDYGLTVFAPTRHLIKSDG
YYPKAKEILDFKVIELNKKFKRIYISHTSTHRSVPNFLKKAYVKRRIT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgttagattcaattatcaataaatataatcctaaagatcctagtactcatgggatcttg
aaatatttctccgaacaactttcagagaaagaaaatatttctttcattctagaaattttt
aaaagtggatcatggttgttagcaacggaaattagtagaacaaactcttcggaggaacta
aatgagaaaaccaccatacaattttacggattattcgaccagtgggtagcaaatagaata
gatttttcaaacactattttttcatcaagaactagaaatccatatataacaacaaattta
cacttccaatttagagaggctcttttatctattaaaaatcttgatttcccagaaaaggga
atgaaaattcttgagaaactgatattaaatgtcaatccaatctatttagaaagatttttg
gacggaactttatggattgtaattgaagaatatgaagaaaaggaaattgaagtcttttta
agttattttataaaagcttatatagcaaacagttcgataaatattattaattttttatac
cattcattaaatgttttagcctttactcataaaatatattacttatcagatatatttatt
aaatctctaaatcaagtttctaaattgataatagagaatagaacttcaagcaattataag
caattaatattagttcttttaattgatctgatacaaaataaaaaattagatttatctagc
tctaaatatgaatacgttatcaaagaaactctggattccttagatcaaggtagtatatct
aacttgaattttcttttgtttttaaaacgatttaattattcatttgacgaatatgatgcc
gtattggaatcagaagcattgcttgaaaatataagtgaaaaaatttccagtatcccaaaa
agaacagatattgaaatccaagcattattacatcatttaataaagacttcgaatgaatat
tttgaactctttttatttcatcaagaattaatgaatcagcaatatgcagaagagcatata
ttaagatttataaacttaattgatgaaatcagaattgcatttttacccattttatggtac
gaagaatttttgaatttttcgcccataaatggagaaatatcttttgcgacagaagcaggg
tttgaagtaaaagttgacgaagaattctttaaaagaaagatcttagaaaagaaaatagaa
tcaaaaattacagacgattttattttacattttggttatggctttcttaacaccaagtat
ttaacagggtatcctaaagcaaacttattcttaaaacgttcaaaacaaactagaaagcct
ctagatttaaaagataaagatcaaatcgaagaaatagaaagattctatatttctaattta
aattattctgcatctaacaaaaagaacgttttaattttaactccatttaaggatactata
cataaaattattacaaaatatgagctgaaagccttttttcattcgcttgaattattctta
atcgaaaaagccaataactacttatcaatactgtctccatttcctaaaaaatcccactca
tttaaaattattgttcctccaaaatatatttctgaatataatcttaatttatctgaagga
aaattttgggaaattttaaaacgtttaagaccatatctttataagattatatatttaaat
cataaagagaaagttgaatctataaaaaagataaattatgccttcaaaaatgatcgatac
attagtggagtaattaaatcgacctcaaaaggaggactaatagtcgatatctttggagta
gaagcttttcttcctggatctcaaatcgacgtaaaacccgttattgattatgattcttat
ataggtaaaacacttgactttaagattgttaagattagcgaagcaaatcaaaacactgtt
gtttcacgcagattaattattgaatctgttattgaaatgcaaagagaggaaattagtaaa
aaacttgaaaaaggccaaattttagaaggaactattaagaatatcacttatttcggagca
ttcatagatttaggaggaatagatggattattatatattaccgatatttcatggggaaga
attaatcatccaagtgatttattagagttgaatcaaaaaatacatgtggtagtcttagat
tatgaagataacaaaaaaagaatttcactcggcttgaaacaattacaccctaacccatgg
gatgctcttgatgctaaaataaaaatcggaactagggtaactggtaaggttgtaagtgta
gaagattacggcatttttcttgaaatagagccaggtgttgaaggtctagtccatatttct
gatattagctggtcatctactacagtgaactgtaaggaactctttaaacttggggacttt
ctcgaggcgattgtgattacagttggtatagaagaaagaaaaatgtctctagggttgaaa
caattaatatctgactcatggatcaataagattaaaaaatatacaaaaggaaccaaacac
atagcaaaagttttaaatttagtagattatgggatttttgttgaattagaagaagacgtt
attggtctagttcatatatctaagatattatcttacagaagaattaatcatccggcagaa
ttcacaaaaattggtgaaaaaattaatatctccattttagaaattgataaaaaaaataga
aggttatcattaggttacgaaataaaagaagaaaatggatatttatttgaaaaagtgttt
ttagttaattctatccataaaggagaaattattgacataaagaaaaatggagctattata
gcgttagattatggacttaccgtctttgctccaactcgccatttaattaaatctgatggt
tactatccgaaagcaaaggagatacttgatttcaaagttattgagcttaataagaaattt
aaaagaatatacatttctcataccagtactcatcgttctgtccctaattttttaaaaaaa
gcttatgtaaaaagaagaattacataa
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