Pseudopedobacter saltans: Pedsa_0924
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Entry
Pedsa_0924 CDS
T01430
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
psn
Pseudopedobacter saltans
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psn03016
]
Pedsa_0924
Enzymes [BR:
psn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Pedsa_0924
Transfer RNA biogenesis [BR:
psn03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Pedsa_0924
Prokaryotic type
Methylthiotransferases
Pedsa_0924
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
DUF2226
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ADY51496
UniProt:
F0SAB9
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All DBs
Position
1121746..1123065
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AA seq
439 aa
AA seq
DB search
MDKSVAFYTLGCKLNYSETSTIGRQFQNAGFKMVEFTDKADVYVINTCSVTENADKKCRK
VVKEALKHSPNAYIAIVGCYAQLKPTEISEIEGVDVVLGAAEKFQLLEHIQDLTKKPKAE
IFNKPIKETNEFVASYSFGDRTRTFLKVQDGCDYSCTFCTIPLARGESRSDTIDSIVAQA
KEIAKSGVKEIVLTGVNIGDFGIRNGKREDKFFDLVKALDEVEGIDRIRISSIEPNLLST
EIIEFVSKSKRFVPHFHIPLQSGSNKILGLMRRRYRRELYVDRVREIKRVMPDCCIGVDV
IVGFPGETREDFIDTYNFLNDLDISYLHVFTYSERENTPAAEMEGSVPGSQRADRSKMLH
ILSDKKRRAFYETQIGKVGEILFEGDLKEGFMHGFSKNYVKVKIQYDPLLVNEIKSVKFG
NVLPDGEMHGEEIAEILTH
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagtgttgctttttacaccctgggatgtaagttaaactattcggaaacatcc
acaataggcaggcagtttcagaatgcgggctttaaaatggtagagtttaccgataaagca
gatgtttatgtaattaatacatgttccgttacggaaaatgcagataaaaaatgccgaaag
gttgtaaaagaagctttaaaacactctccaaatgcgtacatcgctattgtcggctgctat
gcgcaattgaaaccaacagaaatttcagaaatagaaggagtcgatgtggttttaggagct
gcagagaaatttcagttgttagaacatattcaggatcttactaaaaaaccaaaagcagaa
attttcaataaacctataaaagaaacaaatgaatttgtggcttcttattctttcggagac
cgaaccagaacatttctgaaagttcaggatggttgtgattattcctgtactttttgtacg
ataccattagccagaggagaaagcagaagtgatactatagatagcatagtagcacaggca
aaagaaattgccaaatcgggagttaaagaaattgtgctaacgggtgtaaatattggcgat
tttggtatcagaaatggaaaacgcgaagacaagttttttgacttggtaaaagctttggat
gaagtagaaggaatagacagaatcagaatttcttctatagaaccgaatcttttaagtact
gaaatcatagaatttgtatccaaatcaaaacgttttgtacctcatttccatataccttta
caatctggttctaataagattttaggattgatgaggaggagatatagaagagaattgtat
gtagatagagtgcgggaaataaaaagggttatgccggattgttgtatcggagttgatgta
atagttggttttccgggagagacaagagaagattttatagatacctacaactttttaaac
gatttggatatttcttatttacacgtatttacctattctgaaagggaaaatactccagcc
gctgagatggaaggcagtgtaccgggatcccaaagagcagatagaagtaagatgctgcat
atattgtctgataagaaaagacgagctttttatgaaacgcaaataggtaaagtaggtgag
attttattcgagggagatttaaaagaagggtttatgcatggttttagtaaaaactatgta
aaagtaaaaattcaatacgatccacttttagttaacgaaatcaaatctgttaaattcggg
aatgtgttaccagacggagaaatgcatggagaagaaattgcagaaattctaacacattaa
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