Pseudopedobacter saltans: Pedsa_1051
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Entry
Pedsa_1051 CDS
T01430
Name
(GenBank) DEAD/DEAH box helicase domain protein
Organism
psn
Pseudopedobacter saltans
Pathway
psn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pedsa_1051
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_C_2
NAT10_TcmA_helicase
ERCC3_RAD25_C
P-loop_SecA
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADY51622
UniProt:
F0SBH6
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Position
1248012..1249130
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AA seq
372 aa
AA seq
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MANTFRDLGISEQFIQALEENNIIKPTEIQKLAIPYLLKEGKDFIGQAQTGTGKTAAFGL
PVLEQIDANSKVIQVLILCPTRELGQQIAKQLFKFTKYSDKKIFTEAVYGGEKIDIQIGR
LKRPTHIVVATPGRLIDLLERKAINLDHVKTIILDEADEMLSMGFKKDIDKILEYTNGQR
YTWLFSATIPAALDDIIKSYMDEPFKVEIRKEQLVNENIDHKYMVVDLKDKLDLLSRFLK
ENSKARGIVFCRTKKNAELLSKQLYARNFKVEAIHGDMGQRDREKVMRAFKSERLPILIA
TDISARGIDVQNLNYVIHYDLPDQMEYYTHRSGRTARGGRKGLSLIFIAPNDIDKVKDLE
ANLNIKIRNFNS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttggctaatacatttagagatttaggaatatcggagcaatttattcaggctctggaagag
aataatattataaaaccaactgaaatccagaaactggcaattccgtatttgcttaaagaa
ggaaaggattttattggacaggcgcaaaccggaacaggaaagacggctgcattcggatta
cctgttctggagcaaattgatgcaaattcaaaggtaattcaggtgctaattctttgtcca
acacgcgaattgggacaacagattgcaaagcaacttttcaagtttacgaaatattctgat
aagaaaatatttactgaagcagtttatggcggcgaaaaaatagatatccaaatcggaagg
ttaaaacgccccacacatatcgttgttgcaactcctggcaggttaatagatctattagaa
agaaaagccataaatctggatcatgtgaaaaccattattctggatgaagccgatgaaatg
ctgagtatgggatttaaaaaggatatcgacaagattctggaatatacaaacgggcaaaga
tatacctggctcttttctgcaaccatacctgctgctttagatgatattataaaaagctat
atggatgagccttttaaagtggaaattcgtaaagagcagcttgttaatgaaaatatcgat
cataaatatatggtggtcgatctgaaggataaattagatttactttcgcgttttctgaaa
gagaattctaaagcaagaggaattgtattctgtagaacgaagaaaaatgccgaattgcta
tccaaacagctttatgcaaggaatttcaaagttgaagccatccatggtgatatgggacaa
cgtgaccgtgaaaaagtaatgagggcctttaaatcggaaagattacccatacttattgct
accgatatctcggccaggggaattgatgtgcaaaacctgaattatgtaatccattatgac
cttccggaccagatggaatattatacgcataggagtgggaggactgccaggggaggaaga
aaagggctttcattgatttttatagctccaaacgacatcgataaagtaaaggatctggaa
gctaacctgaatataaaaatcaggaattttaacagctag
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