Pseudopedobacter saltans: Pedsa_1385
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Entry
Pedsa_1385 CDS
T01430
Name
(GenBank) hydroxymethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
psn
Pseudopedobacter saltans
Pathway
psn00730
Thiamine metabolism
psn01100
Metabolic pathways
psn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pedsa_1385
Enzymes [BR:
psn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Pedsa_1385
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADY51951
UniProt:
F0SER1
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Position
complement(1634151..1636031)
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AA seq
626 aa
AA seq
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METTKKDLDLISRDPFPASEKIYVKGKIHNVNVAMRRISLSDTKIHNGFGLTEKNEAVTV
YDTSGPYTDPNIQIDVKKGLPRLREQWVLDRKDVNRLDDISSDYGKLRLNDEKLDHLRFV
RNANPLKAKTGNNVTQLHYARKGIITPEMEYIAIRENQQIEILKDSLGERYETLGKQHEG
NSFGALTPKGFITPEFVRQEVAAGRAVIPANINHPEAEPMIIGRNFLVKINANIGNSAVT
SSIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGK
AEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRITGIVSRGGSIMAKWCLAH
HKENFLYTNFEEICEIMKAYDVSFSLGDGLRPGCLADANDAAQFAELETLGGLTKIAWEH
DVQTIIEGPGHVPMHMIKENMEKQLQYCEEAPFYTLGPLTTDIAPGYDHITSAIGAAMIG
WYGTAMLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARFE
FRWEDQFNLSLDPDTAREFHDETLPADGAKIAHFCSMCGPNFCSMKITQDVRTYAKEQGL
EDNEALEAGMAEKSEQFKDKGSEIYL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacaaagaaggatttggatttgatatcaagagatccatttccggcatcagag
aaaatctatgtaaaaggcaaaatacacaacgtcaatgtggctatgcggaggatttcctta
agcgataccaagattcataacggatttggcttaactgaaaaaaatgaagctgtaacagta
tatgacacaagtggaccctatacggatccgaatattcagattgatgtaaagaaagggctt
ccacgacttagggagcaatgggttttggataggaaagacgtaaatcgtttagatgatatc
agttctgattatgggaaactacgattgaatgatgaaaaactggatcatttacgttttgtg
agaaacgccaatccgttaaaagccaaaacaggcaataacgtaactcaattacattatgcc
cgaaaaggaattattactccggaaatggaatatatcgctatccgcgaaaaccagcagata
gaaatattaaaagatagtttgggtgagcggtatgaaacccttgggaagcagcatgaagga
aatagctttggtgcattaacaccaaaaggctttattacacccgaatttgtaagacaagag
gttgcagcaggtcgggcagtaattcccgcaaatatcaatcatccggaagcagagcctatg
attatagggcgcaattttttggtgaaaatcaacgccaatatcggaaattcggcggttacg
tcttcaattgaagaagaagtagaaaaagcagtgtgggcatgccgatggggagcggataca
attatggatttgtctaccgggaaaaatatccatgaaacccgtgaatggattatcaggaat
tcgccagtgcctattggaacggttccgatttaccaggctctggaaaaagtgaatggtaaa
gctgaggacttgacctgggaaatattcagagatacgctgattgagcaggctgagcaaggc
gtcgattattttaccatccatgcgggagttttgttacgatatattccattgacagctaaa
cgaataacaggtattgtctcaagaggaggttctattatggcaaagtggtgcctggcgcat
cataaagagaattttctgtacacaaatttcgaggagatatgcgagatcatgaaagcttat
gatgtttctttctctctgggcgacgggctgagacccggttgtttagctgatgccaatgat
gctgcacaatttgctgaactggaaactttgggagggttaactaaaattgcatgggaacat
gacgttcaaacaattatagaaggaccagggcatgttcctatgcacatgattaaagagaat
atggagaagcaattgcaatattgtgaagaagctcctttctatactttagggccattaacc
acggatatcgcccccggttatgatcatatcacttcggcaataggtgcagcgatgattgga
tggtacggaactgccatgttgtgttatgtgactcctaaagaacatttggggttaccaaat
aaaaaagatgttaaagatggggtgattacctataagatagctgcacatgccgcagatctg
gctaagggacatccaggagcacaatatagagataatgccttaagtaaagctaggtttgag
tttagatgggaagatcagtttaacctttctctcgaccccgacacagcaagggaatttcac
gatgagactttacctgcagatggagctaaaattgcccatttctgttctatgtgcggccca
aatttctgctcaatgaaaataacacaggatgtacgtacttatgcaaaagagcaggggtta
gaagacaacgaagccttggaagcgggaatggcggagaaatcggagcagtttaaagacaag
ggaagcgaaatctatttgtag
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