Pseudopedobacter saltans: Pedsa_2046
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Entry
Pedsa_2046 CDS
T01430
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
psn
Pseudopedobacter saltans
Pathway
psn02024
Quorum sensing
psn03060
Protein export
psn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Pedsa_2046
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Pedsa_2046
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pedsa_2046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psn02044
]
Pedsa_2046
Secretion system [BR:
psn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Pedsa_2046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
ADY52598
UniProt:
F0SAH8
LinkDB
All DBs
Position
2397007..2399973
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AA seq
988 aa
AA seq
DB search
MQNKGIIKFATAVLSVLSLYALSFTFFANKVEDDAKAYANGDPAKERSYLDSISSQPVYP
IFGHTYQYVKEREIALGLDLKGGMNVTMEIDLSALLKSLANNPTDANFNQALENAQEKLK
TNSKEGLVSLFVSEFEKLSPNVKLASFYSTKDNSSDLKIDDSNAKVKTYLEKQATSAIER
SFNILRTRIDKFGVTQPNIQLQEGSNRILVELPGVTDQERVRKLLQGSAKLEFYETFDNH
EIFPLIQNINNILAAKQPKEATKKAEATTTAVDTTKGAKPALLSAKKDSTSKDSSENMAA
LAKANPLFSVLSPATYQGANGEQGLRPGPVVGYVALKDTAKVNEYLREPEIKAVIPPNVK
LMWGVKSISKDAKVYELYAIKGSGINNGAVLEGDVISNAREDFDQKGNPEVTMSMNSTGA
REWKRITAAAAGDPRNEDDNKCIAIVLDDMVYTAPRVGGEIPNGVSSISGNFTVEETKDL
ANVLKAGKLPAPAKIVGEYVVGPTLGKESIEKGVISSVAGLIVVLLFMVFYYNRSGMIAN
FALLFNMFFLVGIMASLGAVWTLPGIAGLVLTIGMAVDANVLIYERIKEELELGKNLKTA
VVDGFKNSYSAILDSQITTLIVGIILLITGTGPIYGFAVTLVIGIFLSIFTAIFITRIVI
DNRLEKGKDLPLYTSFTKNLFKGSPIDFVKDRKKYYIISSVIIIAGLASMLIKGFSYGVD
FQGGRTYVVDFNKEISTIDVREALTKSFENDAPEVKSYGSGVRITTAYLIEDNSDQAEKT
VATKLNDGLKTLNTPYEIKDAQKVGPTVANDIKVSAIWSVLAAIAGIFLYVYIRFRKVSF
GIATIIALLHDVLIVLAIFSIFDGILPFSLDIDQTFIAAILTVAGYSINDTVVIFDRVRE
YLSDERNRNQNMATIINNALNSTLSRTVVTGMSTIFVLIILFIFGGEILRGFSFAMLIGI
IVGTYSSLFVATPVVVEFIRGKKSAENK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggaataattaagtttgcaacagctgtattatctgtactaagtttatat
gcattgtctttcacgttttttgccaataaggtagaagacgatgctaaggcgtatgctaac
ggagatcctgcaaaggaaagaagctatcttgattcaatttcttcacaacctgtttatcca
attttcggacatacttatcagtatgttaaggagcgcgaaattgcgcttggattggactta
aaaggtgggatgaatgtgactatggagatagacttatctgcattgttaaaaagcttagca
aataatccaactgacgctaatttcaatcaggcactagaaaatgcgcaggaaaagttaaaa
actaacagtaaagaaggtttagtttctttattcgtaagtgagtttgaaaagttaagccct
aacgtaaagctggcatctttttattctacaaaagataattcttctgatctaaaaatagat
gactctaatgcaaaagttaaaacttacttagaaaaacaagctacttctgcaattgagaga
tctttcaatattttaagaacccgtatcgacaagtttggtgttacacaaccgaacattcaa
ttacaggaaggttccaacagaattttagtagagcttccgggtgttacagatcaggaacgt
gttcgtaagttattacagggatctgctaaattggagttctacgaaactttcgacaaccac
gaaatattccctttaatacagaatatcaacaatattctagcagctaaacaacctaaagag
gcaactaaaaaagcagaggctacaactactgccgttgatactactaaaggtgctaaaccg
gctttattaagtgctaaaaaagacagtacttctaaagattcgtctgaaaatatggccgct
ttagcaaaagctaatcctttattttctgtattatcacctgctacttaccagggtgctaac
ggtgaacaaggtttaagaccgggaccagttgttggctatgttgctttaaaggacactgct
aaagtaaacgaatatttaagagaaccagagattaaagctgtcatccctcctaacgttaaa
ttgatgtggggtgttaaatctatatctaaagacgctaaggtttacgaactatatgctatt
aaaggttctggaataaacaatggcgctgttttagaaggcgacgtaatttctaatgcccgt
gaagattttgaccaaaaaggtaatcctgaggttacgatgtcaatgaactctaccggtgca
agagaatggaaaaggattacagcagctgctgctggagatccaagaaacgaagatgacaat
aaatgtattgctatcgtcttagacgacatggtttacactgctccacgtgttggcggtgaa
attccaaatggtgtttcttctatttccggaaatttcacggttgaagagaccaaagattta
gccaatgtattaaaagctggtaaattacctgctcctgctaaaattgttggagagtacgta
gttggtccaactttaggtaaagaatctatcgaaaagggagtaatctcttctgttgccgga
ttaatcgtggtattattattcatggtattctactataacagatctggtatgattgcaaac
tttgctttgcttttcaacatgttctttctggtaggtattatggcttccttgggtgcagta
tggacactcccgggtattgccggtctggtactgacgattggtatggcagtagatgcgaac
gtattgatttacgaacgtatcaaagaagagcttgaacttggcaagaatctaaaaacagct
gttgttgatggtttcaaaaactcttattcagcaatattagattcacaaattaccacctta
atcgtaggtattatattattgattacaggtaccggacctatctacggtttcgctgttact
ttggtaattggtattttcctttcaattttcactgcaatatttattacccgtattgttatt
gacaacaggttagaaaaaggaaaagatcttcctctttatacgtcatttaccaaaaacctt
ttcaaaggttctccgattgacttcgtaaaagaccgtaaaaaatactatatcatttcttct
gtaatcatcattgcgggtttagcttctatgctaattaaaggatttagctatggtgtagat
tttcagggaggtagaacttatgttgttgatttcaacaaagagataagtactattgatgta
agagaggccttaaccaagtcttttgagaacgatgcgccagaggtaaaaagctatggtagc
ggcgtaagaatcactacagcttatttgatcgaagataactccgaccaggctgagaagaca
gtagctactaaattaaatgatggtttaaaaaccttaaataccccttacgaaattaaggat
gcccaaaaggttggcccaactgtagctaatgacattaaagtctctgcgatatggtctgtt
cttgcagctattgcaggtatcttcttatatgtttatatacgcttcagaaaggtatctttt
ggtattgctacaattattgcattattacatgacgttttaattgtattggctattttctct
attttcgatggtatattaccattctctttagatatcgaccaaacatttatcgcagctatt
ctaactgtggccggttattctattaacgatacggttgttatttttgacagggttagggaa
tacctttctgatgagagaaatagaaatcagaacatggcaactatcatcaataatgcgtta
aatagtacattaagccgtacggtggttacgggtatgtctactattttcgtgttgattatc
ttattcatctttggtggtgaaatattaagaggtttctcttttgccatgttgataggtatc
attgtaggtacttattcttcattattcgttgcaacaccagttgtagttgaatttatcaga
ggaaagaaatctgcagaaaataaatag
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