Pseudopedobacter saltans: Pedsa_2230
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Entry
Pedsa_2230 CDS
T01430
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
psn
Pseudopedobacter saltans
Pathway
psn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pedsa_2230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psn03400
]
Pedsa_2230
Enzymes [BR:
psn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pedsa_2230
DNA repair and recombination proteins [BR:
psn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pedsa_2230
RecFOR pathway proteins
Pedsa_2230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_16
AAA_22
Mg_chelatase
Rad17
NB-ARC
TIP49
TsaE
nSTAND3
Sigma54_activat
AAA_14
Sigma54_activ_2
AAA_PrkA
AAA_18
NPHP3_N
AAA_33
DUF815
RNA_helicase
NTPase_1
TniB
Bac_DnaA
ABC_tran
NACHT
Torsin
AAA_17
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADY52780
UniProt:
F0SCE6
LinkDB
All DBs
Position
2596422..2597435
Genome browser
AA seq
337 aa
AA seq
DB search
MNEHLDPNSEKLSFTDKEIEKVLRPQEFDDFTGQEKILENLKIFVKAAKLRGEPLDHVLL
HGPPGLGKTTLSHIIANEMGVGIKITSGPVLDKPGDLAGLLTNLDAGDILFIDEIHRLSP
LVEEYLYSAMEDFKIDIMLETGPNARSVQISLSPFTLVGATTRSGLLTAPLRARFGINSR
LQYYDAKLLTTIVIRSAYILKTPITETGAYEIARRSRGTPRIANALLRRTRDFAQIKGNG
EIDTEIAKYALNALNVDEHGLDEMDNRILSTIVDKFKGGPVGLKTIATAVGEDEGTIEEV
YEPFLIQEGYLMRTSRGREATPAAYQHLGRIKSGTLF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcatcttgacccgaatagtgaaaaattatcttttacagataaagaaatagag
aaagtgcttcgtccacaagagtttgatgactttactggacaagaaaaaatactggaaaat
ctaaagattttcgtaaaggcggccaaactacgtggcgaacccttagatcatgttctttta
catggtcctccaggtcttggaaaaacaaccctctcgcatatcatagcaaatgaaatggga
gttggcataaagattacaagcggtcccgtattggacaaacctggcgatttggcaggtctg
ctcaccaacttagatgctggcgatatccttttcattgatgaaatacaccgcctgagtcct
ctggtagaagagtacttgtattctgcaatggaagactttaaaattgacatcatgctcgaa
accggccccaacgcccgttcagtacagatttcattgagtccttttacactggtgggagcg
acaacccgttcgggattattaacagctccattaagagccagatttggtataaattccaga
ttacaatattacgatgcaaagctgttgacaactattgtcatccgttccgcatatatcctg
aaaacgccaattacagaaacgggggcttatgagattgccagaagaagtcgtggtacacct
cgtattgctaacgcattactaagaagaacccgtgactttgcgcaaattaaaggaaatggc
gaaatagatacagaaattgctaaatatgctttaaatgcgttgaatgtagacgaacatggt
ttagacgaaatggacaatcggattctttctactatagtagacaagtttaaaggtggtccc
gttggtttaaaaaccattgctacagcggttggagaagatgaaggaacaattgaggaagtt
tatgagcctttccttattcaggaaggttatttaatgcgaacttcaagaggaagggaagct
actcctgcagcatatcagcatcttggaagaattaaatcaggaactcttttttaa
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