Pseudopedobacter saltans: Pedsa_2551
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Entry
Pedsa_2551 CDS
T01430
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psn
Pseudopedobacter saltans
Pathway
psn00061
Fatty acid biosynthesis
psn00071
Fatty acid degradation
psn01100
Metabolic pathways
psn01212
Fatty acid metabolism
psn02024
Quorum sensing
psn04146
Peroxisome
Module
psn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pedsa_2551
00071 Fatty acid degradation
Pedsa_2551
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pedsa_2551
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pedsa_2551
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psn01004
]
Pedsa_2551
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psn04147
]
Pedsa_2551
Enzymes [BR:
psn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pedsa_2551
Lipid biosynthesis proteins [BR:
psn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pedsa_2551
Exosome [BR:
psn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pedsa_2551
Exosomal proteins of breast cancer cells
Pedsa_2551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADY53095
UniProt:
F0S4S7
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All DBs
Position
2996227..2998005
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AA seq
592 aa
AA seq
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MQGISRVFDLLSYNKANYSYNDVLAYKKDSKWVKYSCEDFIKISDQVSKGLIRLGIKKDD
KVAIMAENMPEWNFCDFGIMQIGAAQVPMYPTLAENDIKFIFKDADIKVVFVSSEPLYQK
LKRIAEENGQDIKIYTFEKIDGAPHWTEIIETHDDESFIDLDEYRSKITGDDLLTLIYTS
GTTGTPKGVMLTHKNLLSNIEASAKLYPEGVTRALSFLPLSHIFERMVVYMYFYLGISVY
YAESLDTIVQNLSEVKPHCFTSVPRLLEKVYDKIVAKGHELTGIKKSLFFWALNLGLKYE
LDGANGAWYELQLKLARKLIFKKWKDALGGEIMLIVSGGAALQERLARVFWGAGIKVLEG
YGLTETSPVISVNGPRKGETKFGTVGKPLFNVEVKIAEDGEILCKGPSLMKGYYKRDDAT
QEAVTEGGWFHTGDIGNLKDGFLTITDRKKEVFKTAGGKYVAPQVLETKFKESTFIEQVM
VLGENRRFPSALIVPNFEKVIEWAKRNQIAETDHQKLAKNQKVIDKIWSEVDRLNADFGK
WEKVKKIALLPHEFTIDGGELTPKLSLRRKVILKNNEAAIEEIYKDEEHHDI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaatttcaagagtattcgatctgctttcttataacaaggcaaattatagttac
aacgatgttttagcctataaaaaagactccaaatgggtaaaatattcctgcgaagacttc
ataaaaatctctgaccaggtgagtaaaggactcattcgattaggaataaaaaaagatgac
aaagtcgcgattatggcggaaaatatgcccgaatggaatttttgcgatttcgggatcatg
caaattggcgccgctcaggtcccaatgtacccaactttggccgagaatgatattaagttt
atttttaaagacgcagatataaaagtggtatttgtctcgtctgaaccattataccaaaag
ctcaaacgcattgcagaggaaaatggtcaggatatcaaaatctataccttcgaaaagatt
gatggtgcgccccattggacagaaattatcgaaacacatgatgatgagtcgtttattgat
ttggacgaataccgaagtaaaatcacgggagacgacttattaactttaatatacacatcc
ggtacaacaggtacgccaaagggcgtaatgctaacgcataaaaaccttttaagtaatatc
gaggcctctgccaaactttatcccgaaggtgttacaagggcactaagctttttaccctta
tctcatattttcgaaagaatggtggtatatatgtatttttatttgggaatctctgtttac
tatgcagagagcctggatacaattgtacaaaacctctcggaagtaaaaccacattgtttt
acaagtgtaccgcgattgctggaaaaggtatacgataaaattgtagctaaaggtcacgaa
cttacagggataaagaaaagcctgttcttttgggcactaaatctgggattaaaatacgag
cttgacggagccaatggcgcatggtatgaactgcaattaaagcttgcaaggaagctgatc
ttcaaaaaatggaaagatgcacttggcggagaaatcatgctgattgtatcaggtggcgct
gctctgcaagaaagattagcaagagtattttggggtgccggcataaaagttctggaaggt
tacggcttaacggaaacatctcctgttatttcggtaaatgggccgcgtaaaggtgaaacg
aagttcggtactgtaggaaaacctttattcaatgtagaggtaaaaattgcagaagacggt
gaaatcttgtgtaaaggaccaagcctaatgaagggttattataaaagggacgatgctacg
caggaagccgttacagaaggaggatggtttcataccggtgatataggaaatctgaaagat
ggatttcttacaataacagaccgtaaaaaagaagtatttaaaactgccggaggaaaatat
gtagcgcctcaggttctagaaaccaagttcaaagaatccacgttcatagagcaggtgatg
gttctgggtgaaaacagacgtttcccgtcggctctaattgttccaaatttcgaaaaagtg
attgagtgggctaaacgcaaccaaattgcggaaactgatcaccaaaagctggccaaaaac
cagaaagtaattgataaaatatggtctgaggtggaccggttaaacgccgatttcggcaaa
tgggaaaaggtaaaaaagatagcgctgctaccacatgaatttaccatcgacggcggggaa
ttaactccaaaacttagcctaagaagaaaggtaatcctcaaaaataatgaagccgctata
gaggagatctacaaagacgaagaacatcatgatatttaa
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