Pseudopedobacter saltans: Pedsa_2811
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Entry
Pedsa_2811 CDS
T01430
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
psn
Pseudopedobacter saltans
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psn03021
]
Pedsa_2811
03009 Ribosome biogenesis [BR:
psn03009
]
Pedsa_2811
Transcription machinery [BR:
psn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pedsa_2811
Ribosome biogenesis [BR:
psn03009
]
Prokaryotic type
rRNA transcription factors
Pedsa_2811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_2
KH_NusA_C
S1
KH_1
Motif
Other DBs
NCBI-ProteinID:
ADY53352
UniProt:
F0S7U7
LinkDB
All DBs
Position
complement(3349092..3350327)
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AA seq
411 aa
AA seq
DB search
MSSINLIDSFQEFKDFKNIDRPTVISVLEEVFRSMLRKRFGTDENCDVIVNPDNGDLEIW
RTRTVMEDGFSEDDDLEIELADAHKIDPDLEVGDDFIEQITLESFGRRAILAARQTLVSK
ILELEKDEIFKNYKDRIGEIVTGEVYQVWKKETLVLDDEGNELILPKTEQIPADYFKKGD
SVRAVVLKVDMMNANPKIIISRTAPAFLQRLFELEVPEVFDGLITIKNIVREPGERAKVA
VESYDDRIDPVGACVGMKGSRIHGIVRELKNENIDVINFTNNISLYIQRALSPAKISSIK
LDDETKRAAVYLKPDQVSLAIGRGGHNIKLAGKLTGYEIDVYREASEEDEDVDLDEFSDE
IDSWIIDELKKVGLDTAKSVLALNVNELVKRTDLEEETIEEILGILRAEFE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcattaatttaatagattcatttcaagagtttaaagacttcaagaatattgac
aggccaacggtaattagcgtgttggaagaggtgtttcgcagtatgttgcgcaaacgtttc
ggtactgatgaaaactgtgacgttattgtaaacccagataatggtgaccttgagatctgg
agaaccagaacagtaatggaagatggtttttcagaagatgatgatttggaaatagagtta
gcagacgctcataaaatcgacccggatctggaagttggcgatgattttattgagcaaatt
actttagaaagttttggccgcagggctattcttgccgctcgtcagactttggtgtctaaa
attttggaactggagaaagatgagatcttcaaaaactataaagatagaattggagaaatt
gttactggtgaagtttatcaggtttggaaaaaagaaactttagtattagatgatgaaggt
aatgagttgattcttccaaaaactgaacaaatcccggcagattatttcaaaaaaggtgat
tctgtaagagcagtagtgttaaaagtggatatgatgaatgcaaatccaaaaattatcatc
tccagaacggctccggcattcttgcaacgtttgtttgagcttgaagtgcctgaagttttt
gacggtttaattactattaagaatattgtaagggaaccgggagaaagagctaaggttgct
gtagaatcttatgacgatcgtatcgatccggttggtgcctgcgtaggtatgaaaggatcc
cgtattcacggaatcgtaagagaattgaaaaatgaaaatatcgatgtaatcaattttaca
aacaatatttcattatatatacaaagagctttgtcacctgcaaagatatcttctatcaaa
ttagatgatgaaactaaaagagctgcagtttatttaaaaccggatcaggtttctttagcg
attggtagaggtgggcacaatattaaattggcaggtaaattgacgggttatgagatcgac
gtatacagagaagcttctgaagaagacgaagacgtagatttagacgaattctcagacgaa
atcgatagctggattatcgacgaacttaagaaagttggtttagatacagcaaagagtgtg
cttgcgcttaatgtaaacgaattagtgaaacgtacagaccttgaagaggaaactatagag
gaaatcttaggaattttaagggctgagttcgaataa
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