Pseudopedobacter saltans: Pedsa_3128
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Entry
Pedsa_3128 CDS
T01430
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
psn
Pseudopedobacter saltans
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psn03032
]
Pedsa_3128
03036 Chromosome and associated proteins [BR:
psn03036
]
Pedsa_3128
03400 DNA repair and recombination proteins [BR:
psn03400
]
Pedsa_3128
DNA replication proteins [BR:
psn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Pedsa_3128
Chromosome and associated proteins [BR:
psn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Pedsa_3128
DNA repair and recombination proteins [BR:
psn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Pedsa_3128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ADY53667
UniProt:
F0SAP6
LinkDB
All DBs
Position
3719066..3719371
Genome browser
AA seq
101 aa
AA seq
DB search
MTKAEIIAEIANKTGIEKVDVQETVEAFFKVVKNSMISGENVYVRGFGSFVVKKRAEKTA
RNISKNTAIIIPEHFVPSFKPAKAFVDKVKVGNKKAKAVNA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaaattattgcagaaattgctaataagaccggaatcgagaaggtagat
gtacaagaaactgtagaggcattctttaaagtagttaaaaattctatgattagtggcgag
aatgtttacgttagagggtttggtagttttgtagtaaagaaaagagcagagaaaacagca
agaaatatctctaaaaacacagctattattatcccagagcattttgtgcctagctttaag
ccagcaaaagcttttgttgataaagtaaaagtaggaaacaaaaaagcaaaagcagtaaat
gcataa
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