Pseudopedobacter saltans: Pedsa_3130
Help
Entry
Pedsa_3130 CDS
T01430
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
psn
Pseudopedobacter saltans
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psn03019
]
Pedsa_3130
03009 Ribosome biogenesis [BR:
psn03009
]
Pedsa_3130
Messenger RNA biogenesis [BR:
psn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pedsa_3130
Ribosome biogenesis [BR:
psn03009
]
Prokaryotic type
rRNA processing factors
Pedsa_3130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ADY53669
UniProt:
F0SAP8
LinkDB
All DBs
Position
3720479..3722029
Genome browser
AA seq
516 aa
AA seq
DB search
MVKELIINSAPGGVTIALVQDKQLVELNKEQINNNYAVGDIYLGRIKKIMPGLNAAFVDV
GYEKDAFLHYLDLGPQVQSLLKLTRQARNGNFTDYLLSSFKREEDIDKSGKISTILSKDL
LLPVQIAKEPISTKGPRLSSDLSIAGRFVVLVPFSDVISISKKIKSNTERTRLRKIVEGI
KPKGFGIIIRTVSEKKGVAEIQKDILDLVSKWETLMKKIPKTGPAKRILGEMGRTSTILR
DILNADFTHVYVDDPALFEEVKSYVHEISPEMESIVKLYKGKEPIFEHFGLEKQIKASFG
KTVNLAGGAYLVIEHTEALHVIDVNSGNRTANPENQEENALQVNKEAAKEIARQLRLRDM
GGIVVIDFIDMHKAPNRKELFDFLKTEMSHDRAKHTILPPSKFGLVQITRQRVRPEMNIV
TSEKCPTCGGTGEIKASIVLIDDIENNLNYILNEQAEKGITLAVHPYVEAFIKRGFLSKQ
VKWFFKYGQWVKVKGITSYHLTEFAFMNNKEEEIKL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaagagttaattattaattcggccccaggaggggttactattgcattagtgcaa
gacaagcaacttgtagaactcaacaaagagcaaatcaacaacaattatgctgttggagac
atttatctgggacgaattaaaaaaattatgcccgggcttaatgctgcttttgtagatgtg
ggttacgagaaggatgcttttttgcattatttggatttaggaccacaggttcaatcttta
ttaaaactaacaaggcaagctagaaatggcaatttcacagactatcttcttagcagtttt
aaaagagaagaagatatcgacaagtctggaaaaatctctacgattttatcaaaagactta
ttgctgcctgtgcagattgccaaagaacctatttctactaaaggcccaaggttaagttct
gatctttctatagccggtagatttgttgttttagttcctttttcggatgtaatttctatc
tccaaaaagatcaagagcaatacagagcgtacccgcttaagaaagatagtagaaggaatt
aagccaaaaggctttggaattattattaggacggtttctgagaaaaaaggcgtagcggaa
atccaaaaggatattctggatctggtatcgaagtgggaaactctgatgaagaaaatccct
aaaaccggaccggcaaaaagaatactcggagaaatgggaagaacatctaccattcttcgg
gacatactgaacgctgattttacacatgtttatgttgatgatccggcattgtttgaggaa
gtaaagtcttatgtacatgaaatttctccggaaatggaaagtattgttaagctttacaaa
ggcaaagagcctattttcgaacattttggactggaaaaacaaattaaagcctcttttggc
aagacagttaatcttgcaggtggtgcatatctggtaatagagcatacggaagcactgcat
gtaatcgacgtaaatagcggaaacagaacagctaatcctgaaaatcaggaagagaatgca
ttgcaggttaataaggaagcggcaaaagaaattgccagacaacttcgcttgcgagatatg
ggaggtattgtagtaatcgattttatcgatatgcacaaagctccaaatcgtaaagagttg
ttcgattttctgaaaactgaaatgagccatgatagggctaagcatactattcttcctcca
agcaagtttggattggtacagattactcgtcaaagggtaagaccggagatgaatattgta
accagcgaaaaatgtcctacttgtggcggaacaggagagattaaagcgagtatcgtcctg
attgatgatatagagaataatctgaattacattttaaacgaacaagcggaaaaagggatt
acactagctgttcatccttatgtagaagcgtttattaaaagagggtttttgtctaagcaa
gtgaaatggttctttaagtacgggcaatgggtaaaagtaaaaggtattacctcataccac
ttaacggaatttgcctttatgaataataaagaagaagagatcaagctttaa
DBGET
integrated database retrieval system
