Pseudopedobacter saltans: Pedsa_3140
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Entry
Pedsa_3140 CDS
T01430
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psn
Pseudopedobacter saltans
Pathway
psn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pedsa_3140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psn03400
]
Pedsa_3140
Enzymes [BR:
psn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Pedsa_3140
DNA repair and recombination proteins [BR:
psn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Pedsa_3140
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADY53678
UniProt:
F0SAQ7
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All DBs
Position
3732812..3733579
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AA seq
255 aa
AA seq
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MKIISYNVNGIRAAINKGWLDWLQATNADVVCLQEIKATPDQIQDIHKLSELGYHHFWYP
AKKKGYSGTAILTKHEPLHVEYGCGIEAYDDEGRVIRADFEKFSVISAYFPSGSSGDERQ
HFKYQFLADFEIYAADLMNTYPNLLICGDYNICHRAIDIHNPKSNANSSGFLPEEREWME
RFINSGFIDTFRHLNPDPHHYTWWSYRAGARAKNLGWRIDYHLLSSTMVENIKRAAILPE
AKHSDHCPILLELQW
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatatcgtataacgttaacggaattagggcggcaataaataaaggctggttg
gattggctacaggcgacaaacgcagatgtggtttgtcttcaggaaattaaagctactccg
gatcaaattcaggacatacataagttaagtgagttgggatatcaccacttttggtacccg
gcaaagaaaaagggttatagcggaacggctattctgactaaacatgagcctttgcatgta
gaatatggatgcggaatagaagcttatgacgacgaaggcagagtgataagagctgatttt
gaaaagttctccgtaattagtgcttattttccttccggatctagcggggacgaaagacag
cattttaaataccagtttttagcagattttgaaatttatgctgcagatttaatgaatact
tatcctaatttattgatttgcggggattataatatttgtcacagagctatagatatccat
aaccctaaatccaatgccaactcgtctggattcttaccggaagagcgtgagtggatggaa
aggtttataaattccgggtttatagatactttccgacaccttaatccagatcctcaccat
tatacctggtggagctacagagctggcgccagagcaaaaaacttaggttggcgtattgat
taccatttattgtcttctacaatggtggaaaacataaaaagagcggctattttaccagag
gctaaacattctgatcactgtccgatattattggaactccagtggtaa
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