Pseudopedobacter saltans: Pedsa_3457
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Entry
Pedsa_3457 CDS
T01430
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
psn
Pseudopedobacter saltans
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psn03009
]
Pedsa_3457
Enzymes [BR:
psn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Pedsa_3457
Ribosome biogenesis [BR:
psn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pedsa_3457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ADY53990
UniProt:
F0SE68
LinkDB
All DBs
Position
complement(4131177..4132367)
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AA seq
396 aa
AA seq
DB search
MPFDKYRKSRDDKSENVGKKSFKKDYSDKPYSEKKDGYRGERRSFDKDKQRDFNDSKPYR
SSKGDSFGSKRTYGNENVNFEGKKDRNFPNQERSERGYKKFDKEKSFKQRDNGFRKGGRK
PFENDFEKPKPYEERKDAQVRLRSRKNTSQQSSTPKEPDQIRLNRYIANSGICSRRKADE
LITSGAITVNDVVVSELGAKVNPTTDKVKYNGQLLKREKMVYVLLNKPKDFITTTEDPQE
RKTVMELVKNATSERIYPVGRLDRNTTGLLLLTNDGDLAEKLSHPRNNITKIYNVELSKN
LTQGDFNKIAFGVELEDGFIKPDAVSYVSGGTKKEIGIQIHSGKNRIVRRIFESLGYEVE
KLDRVIYANLTKKDLTRGKWRFLTENEIIQLKHFIK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgccattcgataaatacaggaaaagtcgcgatgacaagtccgaaaatgtgggcaagaaa
tcgttcaaaaaagattattctgataaaccctattcagaaaaaaaagatggttaccgaggt
gaaagaaggagctttgacaaggacaaacaaagggacttcaatgattctaagccttatcga
tcctcaaaaggggattctttcggttccaaaagaacttacggtaatgaaaatgttaatttc
gaaggtaaaaaagatagaaatttccccaatcaggagagatcagaaagaggatataaaaaa
tttgataaagaaaaatctttcaaacaacgtgataatggttttagaaaaggaggaagaaag
ccttttgaaaatgattttgagaagccgaaaccatatgaggaaagaaaagacgcacaggtt
agattaagatcaagaaaaaacacttcacaacaatcttcgactccaaaagaacctgaccaa
atcaggctaaatagatatatcgccaattcgggaatttgctctcgaagaaaagctgatgaa
ttaattacttccggtgcgattacagtaaatgatgtcgtggtatccgaattaggagcgaaa
gtaaaccctacaacagataaagttaaatataatggccaactcttgaaaagagagaagatg
gtttatgttttattgaataaacccaaagatttcattacaactacagaagaccctcaggag
cgtaaaactgtaatggagctggtaaaaaatgctacatccgaaagaatatatccagttgga
agactagacagaaacacaactggccttttactattgaccaacgatggtgatttagcagaa
aagctttctcatccgagaaataatattacaaaaatttacaacgttgaactaagtaagaac
ttaacacaaggtgactttaataaaatagcctttggtgttgaattagaggatggatttatt
aaacctgacgctgtaagttatgtttctggaggtacgaaaaaagagattggtattcagata
catagtggaaaaaacagaatcgttagaagaattttcgaaagtcttggttacgaggtagaa
aaattggatcgcgtgatttacgccaatttgactaaaaaggacctcaccagaggaaaatgg
agattccttactgagaatgagataattcagttgaaacactttataaaataa
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