Pseudarthrobacter sp. NIBRBAC000502770: NIBR502770_07285
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Entry
NIBR502770_07285 CDS
T11331
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
psnb Pseudarthrobacter sp. NIBRBAC000502770
Brite
KEGG Orthology (KO) [BR:
psnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psnb03019
]
NIBR502770_07285 (hrpB)
Enzymes [BR:
psnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NIBR502770_07285 (hrpB)
Messenger RNA biogenesis [BR:
psnb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NIBR502770_07285 (hrpB)
BRITE hierarchy
Other DBs
NCBI-ProteinID:
QDG88286
LinkDB
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Position
1505150..1507753
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AA seq
867 aa
AA seq
DB search
MIPPDGSPAAGTFNLSAISAGLAFEASLPALQQALARGAVVVQAPPGTGKTTLVPPLLAN
LHAGDGRVIVTQPRRVAARSAARRLAALDGTGLGGRVGYTVRGERQAGPGTLVEFVTPGI
LLRRLLADPGLDGTAAVVLDEVHERGLETDLLAGMLAEVRALRGDLTLVAMSATLDATRF
AALLRDPDDGSPAPVVGCPAVNYPLEVHWLPAPAARLDARGVTPAFLDHVAEAAADAHVR
ALGRDSAVDALVFLPGAREVSRVAASLRGLLGSAVDVLELHGQVAAAEQDRAVAGRRPGD
APRIIVSTDLAESSLTVPGVRLVVDSGLAREPRRDSGRGMSGLVTISCSRASADQRAGRA
ARQGPGLVVRCYSQQAYGAAPAHVTPEINVADLAGAPLTLACWGAPGGKGLELPDAPPRG
SMDDAVEVLRELGAVTGEGQVTAAGRALAAIPADPRLARALLDGGTSTGRPLAAEVVAAL
TGDHRAPGGDLPRLLAQLRADKGTAGRRWAEESSRFAAVARRQGAGASTIAATTSGPEAV
GAVVALAFPDRVARRVAGSADAGQYLLASGTRAGLPAGSTLSDHEWLAVAEVARAAGRDA
AGTGAVIRAAAPVTAATAAAAASHLLTDTVDAAFVGGRLSARRTRRLGSIILSTAPARPT
AAQGRVAVAAALQSEGLAALSWSAAATSLRRRLDFLHREAGEPWPDVSDPALLDRLDEWL
GPELEELAAGKSVGSIDLANPLGRLMPWPEAARLDVLAPEILEVPSGSRIRIEYPEPGDA
AAPVVAVKLQECFGLAESPRLVDGRVPVLFHLLSPARRPLAVTADLTSFWAGPYGQVRGE
MRGRYPKHPWPEDPWSAPATARTKHRK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgattcctcctgacggcagccctgccgccggcaccttcaatctttctgccatcagtgcc
gggctcgctttcgaagcctccctgccggcactccagcaggccttggccaggggcgccgtt
gttgtccaggcgcccccggggacaggcaagaccacgctcgtcccgccgctgctcgcaaat
ctgcatgccggtgacggccgcgtcatcgtcacgcagccccggcgtgtcgctgcccggtcc
gccgcccgccgcctcgccgccctcgacggaacaggcttgggcggccgcgttggttacacg
gtccgcggggaacgtcaggccggccccggcaccctggttgaattcgtcaccccgggcatc
ctgctccgccgcctgctggcggaccctggccttgacgggacggccgccgtcgtcctggac
gaagtgcacgaacgcggccttgaaactgacctgctggccggcatgctggcggaggtccgt
gcgctccgcggcgacctcacgctggtggccatgtccgcaacgctggatgcaacccggttt
gcagcgctgctccgcgatcccgacgacgggtccccggcccccgtcgtcggctgcccggcg
gtaaattatccgctggaagtccactggctcccggctcctgccgcgcggctggacgcaagg
ggagtgacgcccgccttccttgaccatgttgccgaggccgccgcggacgcccacgtccgt
gccctgggaagagacagcgccgtggatgcgcttgtgttcctgccgggcgcccgggaggtc
tcccgggttgcggcgtccctccgcggcctgctgggcagtgccgtggatgtgctggaactg
cacggccaggtggcagcggcggagcaggaccgggccgtcgcgggccggcgccccggcgac
gccccgcggatcatcgtctccaccgatcttgccgaatcatccttgacggtgcccggcgtc
cggctggtggtggactccgggctggcccgggaaccgcggcgggactcaggccgcggcatg
agcgggctggtgacgatttcgtgttcccgggcgtccgcggaccaaagggccggccgggcc
gcccgccagggcccgggcctggtggtccgctgctactcgcaacaggcctatggggcagcc
cccgcccacgtcacgccggaaatcaacgtggcggacctggccggcgctcccctcaccctg
gcatgctggggtgcgcccggcggaaagggccttgagctgccggacgcaccgccccgcggg
tccatggacgacgccgtcgaggtactcagggagctgggtgcggtgacgggggaagggcag
gtgacggccgctggccgcgccttggccgccatccctgccgatccccggctggcccgggca
ttgctcgacggcggaacctccaccggacgcccgctggccgccgaggtggtggccgccctc
accggggaccaccgcgctcccggcggagacctgccccggctgcttgcccagctccgcgcg
gacaagggcaccgcagggcggcgctgggcggaggaatccagccggtttgctgccgtggcg
cggcggcagggagcgggggcctcgaccatcgcggccaccaccagcggccctgaagctgtg
ggcgctgtcgttgcccttgccttccccgaccgcgtggcccgccgcgtggccggcagtgcg
gacgcggggcaatacctgctggcctccggtacccgggccggcctgcccgcaggcagcaca
ctgtcagaccacgaatggctcgcagtggctgaagtggcgagggctgcgggccgggatgct
gcgggcacgggcgctgtgatccgtgctgccgcacccgtgacggccgccacggccgccgcg
gcggcctcgcacctgctgaccgacaccgtggacgccgcgttcgtggggggccggctgagc
gcgcgcaggaccaggcggctgggctccatcatcctgtcgacagcaccggcgcgccccacc
gccgcgcagggaagggtggccgtggcggccgcgctccagtccgaggggttggcggcgctg
agctggtcggcggcggcgacctccttgcggcgcaggcttgacttcctgcacagggaggcg
ggagagccctggccggacgtgtcggacccggccctgctggacaggctggacgaatggctt
ggcccggagcttgaggagcttgcagccgggaaatcagtgggctcgatcgacctggccaac
cccttgggccgcctcatgccgtggccggaggccgccaggctggatgtgctcgcgcccgaa
atcctcgaggtccccagcggctcccggatccggatcgagtacccggaaccgggcgacgcc
gccgcccctgtcgttgcggtgaagctccaggagtgcttcgggctggccgagtccccgcgg
ctggtggacggccgtgtcccggtcctgttccacctgctgtcaccggcccgccggcccctc
gccgtaacggctgacctgacctcgttctgggccggtccctacggccaggtgcgtggggaa
atgcggggccgttaccccaagcacccgtggcccgaagacccgtggtcggcgcccgccacc
gcgcgcaccaaacaccgcaaatag
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