Pseudarthrobacter sp. NIBRBAC000502770: NIBR502770_12480
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Entry
NIBR502770_12480 CDS
T11331
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psnb Pseudarthrobacter sp. NIBRBAC000502770
Pathway
psnb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psnb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIBR502770_12480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psnb03021
]
NIBR502770_12480
03400 DNA repair and recombination proteins [BR:
psnb03400
]
NIBR502770_12480
Enzymes [BR:
psnb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIBR502770_12480
Transcription machinery [BR:
psnb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIBR502770_12480
DNA repair and recombination proteins [BR:
psnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIBR502770_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDG89209
LinkDB
All DBs
Position
complement(2595581..2599480)
Genome browser
AA seq
1299 aa
AA seq
DB search
MSSESSFGLMQIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEAARHEELPNLQVEHDIEKKQLIDNRDADIAAIARDLEGE
IARLEGEGAKAADKKKARDSADRQMANVRKRADADIERLEQVWDRFKNLKVADLEGDEGL
YRELRDRYGMYFEGSMGAEAIKKRLENFDMQAESDLLRDVIANGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRKGSAGEGR
IFSSVSEAIMAFDARELHLNSQVKIRLEGFVPYAGWEAPEGWEPGQPALVQTSLGQVVFN
QTLPEDYPWVEAVADKGELSRIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPAAKPEILAGYEERAAKIQGQYDKGLIDDDERRQELIEIWNKATNDIATVMRESLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLVTPIAVADSNGELVLDE
NVENSAYARTLAVDVVDSEGNVLAAAGTDCGDVVIAELFKAGITEVKVRSVLTCESSVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSAGGGDDITQGLP
RIQELFEARTPKGVAPIAEAAGRITIEESERQMRLVITPDDGTEEIAYPVLRRSRLLIED
GDHVAVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGESDLLPGELAERSRFEDANRRVVSEGKTPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKAN
LFTGPSAFSDFSYDTLGGDGAPEFHAIPLDDYDLGNDFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggaagacatc
cgcggctggtcgtacggcgaggttaagaagccggaaaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggcccgtcccgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgttgtggcgtt
gaagtcacccgcgccaaggtccgccgcgagcgcatgggccacatcgaactggccgccccc
gtcacgcacatctggtacttcaagggtgttccgtcccgcctgggctacctccttgacctg
gccccgaaggacctcgaaaaggtcatctacttcgctgcctacatgatcaccagcgtcgac
gaagctgcccgccacgaggaactgcccaacctgcaggttgagcacgacatcgagaagaag
cagctgatcgacaaccgcgacgccgatatcgccgctatcgcccgcgaccttgaaggcgaa
atcgcccgtctcgagggcgaaggcgccaaggctgccgacaagaagaaggcccgcgactcc
gccgaccgccagatggccaacgtgcgcaagcgtgccgacgccgacatcgaacgcctcgag
caggtctgggaccgcttcaagaacctgaaggtcgccgacctcgaaggtgacgaggggctg
taccgcgaactgcgcgaccgctacggcatgtacttcgaaggctccatgggtgccgaggcc
atcaagaagcggctcgagaacttcgacatgcaggccgagtccgacctgctgcgcgacgtc
atcgccaacggcaagggccagcgcaagacccgcgccctgaagcggctcaaggtggtcaac
gcgttcctgaccaccaacaacagcccgctgggcatggtcctcgacgccgtcccggtgatc
ccgccggaactgcgccccatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcctgcttgacctg
ggtgctccggagatcatcgtcaacaacgagaagcgcatgcttcaggaagctgttgacagc
ctcttcgacaacggccgccgcggccgcccggtcaccggaccgggcaaccgtccgctgaag
tccctgagcgacatgctcaagggcaagcagggccgcttccgccagaacctcctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggcctgcccaagcagatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctcaaccacgcccagaacatcaagtcggccaagcggatggtggagcgctaccgc
ccgcaggtctgggacgtgctcgaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacctaccctgcaccgcctgggcatccaggcgttcgagccgcagcttgttgaaggcaag
gcaatccagctgcacccgctggtttgtggcgcgttcaacgccgacttcgacggcgaccag
atggcagtccacctgccgctgagccccgaggcgcaggctgaggcgcgcatcctgatgctg
tcctcgaacaacatcctgaagccctctgacggacgcccggtcaccctgccttcgcaggat
atgatcatcggcctgtaccacctgaccaccaagcggaagggttccgccggcgaaggcagg
atcttctcctccgtatcggaagcgatcatggccttcgatgcacgcgagctgcacctgaac
tcgcaggtcaagatccggctcgaaggattcgttccctacgccggctgggaagccccggaa
ggctgggagcccggtcagccggcactcgtccagacctccctgggccaggttgtgttcaac
cagaccctgcccgaggactatccgtgggttgaagccgttgccgacaagggcgaactgtcc
cggatcgtcaacgacctcgccgagcgctaccccaaggtcgtcaccgcggcaacgctggac
aacctgaaggatgccggtttctactgggcaacccgttcgggcgtcaccgtcgccatctcc
gacatcgaggttcctgctgccaagccggaaatccttgccgggtacgaggaacgcgccgcc
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgccgccaggaactg
atcgagatctggaacaaggcaaccaacgacatcgccaccgtgatgcgtgagagcctgtcc
ccgatgaacaccatcaaccgcatggtgtcctccggtgcacgtggtaactggatgcaggtc
cgccagatcgcgggtatccgtggcctggtggccaacccgaagggtgagatcatcccgcgc
cccatcaagtcctcctaccgcgagggcctgtcggtgctggaatacttcatcgccacgcac
ggtgcccgtaagggcctggccgataccgcactgcgtaccgccaactcgggttacctgacc
cgtcgactggtggacgtctcgcaggacgtcatcgtccgtgaagaggactgcggcaccgag
cgcggcctggtcacgcccatcgccgtcgccgattccaacggtgagctggtcctggacgag
aacgtcgagaacagcgcctacgcacgtacgctggccgtcgacgtcgtcgactccgagggc
aacgtcctcgcagcggccggcaccgactgcggcgacgtcgtgatcgctgagctcttcaag
gcaggcatcaccgaggtcaaggtccgctccgtactcacctgtgagtccagcgtcggcacc
tgcgccctgtgctacggccgctcgctggccaccggcaagaccgtggacatcggcgaggcc
gttggcatcatcgccgcacagtccatcggtgagcccggtacccagctgaccatgcgtacg
ttccacaccggtggtgctgtttccgccggcggtggcgacgacatcacccagggtctgccc
cgtatccaggagctcttcgaagcccgtactccgaagggtgtcgcgccgattgctgaagca
gccggccgcatcaccatcgaagagtccgagcgccagatgcgcttggtcatcaccccggat
gacggaacggaagagatcgcctacccggtcctccgccgttcacgcctgctgatcgaagac
ggcgaccatgtcgccgttggccagaagctgatcaacggtccggtggaccccaagcaggtc
ctgcgcatcatgggtccgcgtgcggcacagaagttcctcgtggacgaagtgcagggcgtg
taccgcagccagggcatcggtatccacgacaagcacgtcgaggtcatcgtccgccagatg
ctgcgccgcgtcactgtcatcgagtccggcgaatcggacctgctgcccggcgaactcgcc
gagcgcagccgcttcgaagacgccaaccgccgcgttgtgtccgagggcaagactccggct
tccggacgtcctgaactcatgggcatcaccaaggcgtcgctggccaccgagtcctggctg
tccgcagcttccttccaggagaccacccgcgtcctgacgcaggcggccatggaaggcaag
agcgatccgctgctcggcctgaaggaaaacgtcatcatcggtaagctgatcccggccggc
acgggtctcccgcgctacaccgaggtcaccgtggagcccactgaggaagcaaaggccaac
ctgttcaccggccccagcgcgttcagtgacttctcgtacgacaccctgggtggtgacgga
gctcccgagttccacgccatcccgctggatgactacgacctgggcaacgacttccggtaa
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