Pseudomonas sp. NC02: C0058_01385
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Entry
C0058_01385 CDS
T10251
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc00521
Streptomycin biosynthesis
psnc00523
Polyketide sugar unit biosynthesis
psnc00525
Acarbose and validamycin biosynthesis
psnc00541
Biosynthesis of various nucleotide sugars
psnc01100
Metabolic pathways
psnc01110
Biosynthesis of secondary metabolites
psnc01250
Biosynthesis of nucleotide sugars
Module
psnc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C0058_01385 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C0058_01385 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C0058_01385 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C0058_01385 (rfbB)
00525 Acarbose and validamycin biosynthesis
C0058_01385 (rfbB)
Enzymes [BR:
psnc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C0058_01385 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AUO20711
LinkDB
All DBs
Position
complement(291605..292687)
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AA seq
360 aa
AA seq
DB search
MRILITGGAGFIGSALIRHLIQHTGHEVLNLDKLTYAGNLESLASIASNSRYEFVQADII
DQATVSAVLARFEPHAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEAARGYWQKLEE
PAKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALFKVVT
EGVVGETYNIGGHNEQKNIDVVRSICGLLEELAPQRPAGVEKFTDLITFVKDRPGHDQRY
AIDASKIERELGWVPQETFETGLRKTVQWYLDNLEWCRRVQDGSYQGERLGNTDFKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcatcaccggcggcgccggattcatcggctccgctctgatccggcacctg
attcaacacaccgggcacgaagtgctcaacctggacaaattgacctacgccggcaatctt
gagtcgctggccagcatcgcgagcaacagccgctacgagtttgtccaggccgatatcatc
gaccaggccaccgtcagcgccgtactggcgcgctttgagccccacgcgatcatgcacctg
gcggccgagtctcatgtggaccgttccatcgacggcccgtcggattttatccagaccaat
atcgtcggcacctacagcctgctggaggccgcacgcggttattggcagaagctggaagaa
ccggcaaagagcgccttccgcttccaccacatctccaccgatgaagtgtatggcgacctg
cacggcgtcgatgacctgttcaccgaaaccacgccctacgccccaagctcgccgtactcg
gccagcaaggccgcgtccgatcacctggtacgcgcctggcagcgcacttacggcctgccg
gtgctgttgaccaattgctcgaacaactacgggccgttccactttcccgagaagctgatt
cctctggtgatcctcaacgccctcgcaggtaaaccattgccggtgtacggcgacggcctg
caagtgcgcgactggctgttcgtcgaagaccacgcccgcgcgctgttcaaagtggtgact
gaaggtgtggtaggcgagacctacaacatcggcggccataacgagcagaagaatatcgac
gtggtgcgcagcatctgcggcctgctggaagaactggcaccacaacgcccggcgggcgtg
gagaaattcactgacctgatcactttcgtcaaggatcgcccgggccacgaccagcgctat
gcgatcgacgccagcaagatcgaacgcgagctgggctgggttccgcaggaaacctttgaa
accggcctgcgcaaaaccgtgcagtggtacctcgataacctggaatggtgccgcagggtc
caggacggcagttatcaaggcgaacgactgggcaacaccgactttaaggatctgatcgca
tga
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